DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsf and PPARA

DIOPT Version :9

Sequence 1:NP_001260109.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001001928.1 Gene:PPARA / 5465 HGNCID:9232 Length:468 Species:Homo sapiens


Alignment Length:97 Identity:38/97 - (39%)
Similarity:61/97 - (62%) Gaps:9/97 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIY-TCKATGDLKGRCPVDKTHRNQCRAC 72
            |:|.|::|||::||.|||:::|:||.|||:|:|....:| .|..:      |.:.|.:||:|:.|
Human    98 LNIECRICGDKASGYHYGVHACEGCKGFFRRTIRLKLVYDKCDRS------CKIQKKNRNKCQYC 156

  Fly    73 RLAKCFQSAMNKDAVQHERGPR--KPKLHPQL 102
            |..||....|:.:|::..|.||  |.||..::
Human   157 RFHKCLSVGMSHNAIRFGRMPRSEKAKLKAEI 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsfNP_001260109.1 NR_DBD_TLX 5..98 CDD:143537 36/91 (40%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748
PPARANP_001001928.1 NR_DBD_Ppar 101..184 CDD:143523 34/88 (39%)
NR_LBD_PPAR 201..467 CDD:132730
Required for heterodimerization with RXRA 304..433
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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