DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dsf and NR4A2

DIOPT Version :9

Sequence 1:NP_001260109.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_005246678.1 Gene:NR4A2 / 4929 HGNCID:7981 Length:609 Species:Homo sapiens


Alignment Length:691 Identity:114/691 - (16%)
Similarity:175/691 - (25%) Gaps:375/691 - (54%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACRLAKC 77
            |.||||.::.:|||:.:|:||.|||||::.:|..|.|.|..:    |||||..||:|:.||..||
Human   274 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKN----CPVDKRRRNRCQYCRFQKC 334

  Fly    78 FQSAMNK-----DAVQHERG--PRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHAHAA 135
            ....|.|     |:::..||  |.|||                                      
Human   335 LAVGMVKEVVRTDSLKGRRGRLPSKPK-------------------------------------- 361

  Fly   136 AAHHAAVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQQGP 200
                                                    |...|:|.:||              
Human   362 ----------------------------------------SPQEPSPPSPP-------------- 372

  Fly   201 APPAGHLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHLLHH 265
                                                                             
Human   373 ----------------------------------------------------------------- 372

  Fly   266 NLIAEAASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGSRSG 330
                                                                             
Human   373 ----------------------------------------------------------------- 372

  Fly   331 GGEEGLSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQMSRHSLSEATTPP 395
                 :||.|...|.:|::                                              
Human   373 -----VSLISALVRAHVDS---------------------------------------------- 386

  Fly   396 SHASLMICASNNNNNNNNNNNNGEHKQSSYTSGSPTPTTPTPPPPRSGVGSTCNTASSSSGFLEL 460
                                                                 |.|.:|..:...
Human   387 -----------------------------------------------------NPAMTSLDYSRF 398

  Fly   461 LLSPDKCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVKCLMPFQTLSKND 525
            ..:||       ||:..:.....||..|....|.|:::           .|.:.:..|..|.|.|
Human   399 QANPD-------YQMSGDDTQHIQQFYDLLTGSMEIIR-----------GWAEKIPGFADLPKAD 445

  Fly   526 QHLLLQESWKELFLLNLAQWTIPLDLTPILESPLIRERVLQDEATQTEMKTIQEILCRFRQITPD 590
            |.||.:.::.|||:|.||..:.|::...|..:.::..|:.........:.:|.|.....:.:..|
Human   446 QDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGEWIDSIVEFSSNLQNMNID 510

  Fly   591 GSEVGCMKAIALFAPETAGLCDVQPVEMLQDQAQCILSDHVR-----LRYPRQATRFGRLLLLLP 650
            .|...|:.|:|: ..|..||.:.:.||.||::....|.|||.     |..|..   ..:||..||
Human   511 ISAFSCIAALAM-VTERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNY---LSKLLGKLP 571

  Fly   651 SLRTIRAATIEALFFKETIGNVPIARLLRDMYTMEPAQVDK 691
            .|||:....::.:|:.:....||           .||.:||
Human   572 ELRTLCTQGLQRIFYLKLEDLVP-----------PPAIIDK 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsfNP_001260109.1 NR_DBD_TLX 5..98 CDD:143537 40/91 (44%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748 52/208 (25%)
NR4A2XP_005246678.1 NR_DBD_NGFI-B 272..346 CDD:143527 34/75 (45%)
NR_LBD_Nurr1 372..609 CDD:132756 69/511 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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