DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsf and nr2e1

DIOPT Version :9

Sequence 1:NP_001260109.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001003608.1 Gene:nr2e1 / 445214 ZFINID:ZDB-GENE-040801-127 Length:396 Species:Danio rerio


Alignment Length:697 Identity:183/697 - (26%)
Similarity:242/697 - (34%) Gaps:335/697 - (48%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGTAGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTH 65
            :.....|:||||||||||||||||||:|:||||||||||||.|||.|.||:  ..:|.|||||||
Zfish    15 LNVKSSRILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKS--GTQGGCPVDKTH 77

  Fly    66 RNQCRACRLAKCFQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHH 130
            |||||||||.||.:..|||||||||||||...:..|:                            
Zfish    78 RNQCRACRLKKCLEVNMNKDAVQHERGPRTSTIRKQV---------------------------- 114

  Fly   131 HAHAAAAHHAAVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASG 195
                                                                             
Zfish   115 ----------------------------------------------------------------- 114

  Fly   196 AQQGPAPPAGHLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPS 260
                                   |.:..||...                       .||:..|||
Zfish   115 -----------------------ALYFRGHKEV-----------------------NGSSTHFPS 133

  Fly   261 HLLHHNLIAEAASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSI 325
                        :.:||              .|:.:......|    ||.               
Zfish   134 ------------TSIPG--------------PPFFTTVTQLEP----HNL--------------- 153

  Fly   326 GSRSGGGEEGLSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQMSRHSLSE 390
                              .:|..|.||                                      
Zfish   154 ------------------ELNTVTSTP-------------------------------------- 162

  Fly   391 ATTPPSHASLMICASNNNNNNNNNNNNGEHKQSSYTSGSPTPTTPTPPPPRSGVGSTCNTASSSS 455
                                         .:|:......|||..|                    
Zfish   163 -----------------------------ERQAIVGLAQPTPKYP-------------------- 178

  Fly   456 GFLELLLSPDKCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVKCLMPFQT 520
                                 |.....|..|.:   ::.|.:.|:.||||||:::|.|.:..|.|
Zfish   179 ---------------------HEVSGTPMYLYE---VATESVCESAARLLFMSIKWAKSVPAFST 219

  Fly   521 LSKNDQHLLLQESWKELFLLNLAQWTIPLDLTPILESPLIRERVLQDEATQ--------TEMKTI 577
            |...||.:||:::|:|||:|.:|||.||:|     .|.|:....:..|.|.        :|::.:
Zfish   220 LPLPDQLILLEDAWRELFVLGIAQWAIPVD-----SSTLLAVSGMNTENTDSQRLNKIISEIQAL 279

  Fly   578 QEILCRFRQITPDGSEVGCMKAIALF-------APETAGLCDVQPVEMLQDQAQCILSDHVRLRY 635
            ||::.||||:..|.:|..|:|.|..|       ..|.....:...:..|||:||..|:.::..||
Zfish   280 QEVVTRFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNASAIAALQDEAQLTLNSYIHTRY 344

  Fly   636 PRQATRFGRLLLLLPSLRTIRAATIEALFFKETIGNVPIARLLRDMY 682
            |.|..|||:||||||:||::..:|||.:|||:|||||||.|||.|||
Zfish   345 PTQPCRFGKLLLLLPALRSVGPSTIEEVFFKKTIGNVPITRLLSDMY 391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsfNP_001260109.1 NR_DBD_TLX 5..98 CDD:143537 70/92 (76%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748 78/218 (36%)
nr2e1NP_001003608.1 NR_DBD_TLX 19..110 CDD:143537 70/92 (76%)
NR_LBD_Tlx_PNR_like 165..380 CDD:132748 83/263 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BC6Q
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H37750
Inparanoid 1 1.050 324 1.000 Inparanoid score I2478
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D373206at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10591
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.900

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