DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dsf and svp

DIOPT Version :10

Sequence 1:NP_477140.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001369011.1 Gene:svp / 41491 FlyBaseID:FBgn0003651 Length:826 Species:Drosophila melanogaster


Alignment Length:90 Identity:21/90 - (23%)
Similarity:33/90 - (36%) Gaps:29/90 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 VSLFCNLTQLQTIDLKYNKIYSV---------TASQFS--------GCT-----SSLLELLLANN 60
            :|.||.::     |...|.:.||         .:..|:        .||     |.::.|.....
  Fly   364 ISFFCGMS-----DCCINSVRSVICALVMPSRRSQSFAVARMYHAFACTICFFFSPMVPLYFYTL 423

  Fly    61 RLKRIIPSVFAPFRRLEVIDLSHNM 85
            .|..:  |:||.|....|:|.:|.|
  Fly   424 GLPSL--SIFAIFVFFRVVDNTHVM 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsfNP_477140.1 NR_DBD_TLX 5..98 CDD:143537 21/90 (23%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748
svpNP_001369011.1 NR_DBD_COUP_TF 200..272 CDD:143516
NR_LBD_COUP-TF 307..542 CDD:132746 21/90 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.