DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dsf and nr2f6b

DIOPT Version :9

Sequence 1:NP_001260109.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_021335261.1 Gene:nr2f6b / 406522 ZFINID:ZDB-GENE-040426-2351 Length:409 Species:Danio rerio


Alignment Length:686 Identity:150/686 - (21%)
Similarity:215/686 - (31%) Gaps:339/686 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GTAGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHR 66
            |...|:...:.|.||||:|||||||:::|:||..||||||.||..|||::..:    |.:|:.||
Zfish    42 GGEEDKACVVDCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLNYTCRSNRE----CQIDQHHR 102

  Fly    67 NQCRACRLAKCFQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHH 131
            |||:.|||.|||:..|.|:      |.:.|.:                                 
Zfish   103 NQCQYCRLKKCFRVGMRKE------GQQTPTV--------------------------------- 128

  Fly   132 AHAAAAHHAAVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGA 196
                                                                             
Zfish   129 ----------------------------------------------------------------- 128

  Fly   197 QQGPAPPAGHLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSH 261
            |:|..||:                 |.|...|.....||.|           |.|||....|   
Zfish   129 QRGRIPPS-----------------HAGISPASMVGAGGDV-----------GGGPGMGADF--- 162

  Fly   262 LLHHNLIAEAASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIG 326
                                                                             
Zfish   163 ----------------------------------------------------------------- 162

  Fly   327 SRSGGGEEGLSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQMSRHSLSEA 391
                                                           .:|.|....:|:...:| 
Zfish   163 -----------------------------------------------FNGQPVSELISQLLRAE- 179

  Fly   392 TTPPSHASLMICASNNNNNNNNNNNNGEHKQSSYTSGSPTPTTPTPPPPRSGVGSTCNTASSSSG 456
                                                          |.|.|..|:.|.       
Zfish   180 ----------------------------------------------PYPNSRYGAQCG------- 191

  Fly   457 FLELLLSPDKCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVKCLMPFQTL 521
                       |:|              |..:|.::..:.:.|..|||||..:.|.:.:..|..|
Zfish   192 -----------QQL--------------QGANSSMMGIDNICELAARLLFSTIEWARNIPYFPDL 231

  Fly   522 SKNDQHLLLQESWKELFLLNLAQWTIPLDLTPIL------ESPLIRERVLQDEATQTEMKTIQEI 580
            ..::|..||:.||.|||:||.||..:||...|:|      .||:..:||:   :...:::..|:.
Zfish   232 PVSEQVALLRLSWSELFILNAAQSALPLHTAPLLAAAGFHSSPMPADRVV---SFMDQVRVFQDQ 293

  Fly   581 LCRFRQITPDGSEVGCMKAIALFAPETAGLCDVQPVEMLQDQAQCILSDHVRLRYPRQATRFGRL 645
            :.:..::..|..|..|:||||||:|:..||.|...||.||::||..|:::.|::||.|..|||||
Zfish   294 VDKLTRLQVDSVEYSCLKAIALFSPDACGLSDPAHVESLQEKAQVALTEYERMQYPGQPQRFGRL 358

  Fly   646 LLLLPSLRTIRAATIEALFFKETIGNVPIARLLRDM 681
            ||.||:||.:.|..|..|||...:|..||..|:|||
Zfish   359 LLRLPALRAVPANLISQLFFMRLVGKTPIETLIRDM 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsfNP_001260109.1 NR_DBD_TLX 5..98 CDD:143537 44/92 (48%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748 74/209 (35%)
nr2f6bXP_021335261.1 NR_DBD_COUP_TF 53..124 CDD:143516 42/80 (53%)
NR_LBD_COUP-TF 167..408 CDD:132746 89/310 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.