DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsf and Eip78C

DIOPT Version :9

Sequence 1:NP_001260109.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001246862.1 Gene:Eip78C / 40345 FlyBaseID:FBgn0004865 Length:862 Species:Drosophila melanogaster


Alignment Length:657 Identity:136/657 - (20%)
Similarity:231/657 - (35%) Gaps:217/657 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACRLA 75
            :|||||||::||.|||:.||:||.|||:|||.:...|.|..    .|:|.|.:.:||:|:.||..
  Fly   361 VPCKVCGDKASGYHYGVTSCEGCKGFFRRSIQKQIEYRCLR----DGKCLVIRLNRNRCQYCRFK 421

  Fly    76 KCFQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHAHAAAAHHA 140
            ||..:.|::|:|::.|.|::.:                                 ..:.|||..|
  Fly   422 KCLSAGMSRDSVRYGRVPKRSR---------------------------------ELNGAAASSA 453

  Fly   141 AVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQQGPAPPAG 205
            |..|             |.||  ||..|.:.|.|     |:........||.....||       
  Fly   454 AAGA-------------PASL--NVDDSTSSTLH-----PSHLQQQQQQHLLQQQQQQ------- 491

  Fly   206 HLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHLLHHNLIAE 270
                   .||.....||    .....||             :||                     
  Fly   492 -------QHQPQLQQHH----QLQQQPH-------------VSG--------------------- 511

  Fly   271 AASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGSRSGGGEEG 335
            ...|.|....|.....::|:.:........::.::||:|             ||.|:.|||  .|
  Fly   512 VRVKTPSTPQTPQMCSIASSPSELGGCNSANNNNNNNNN-------------SSSGNASGG--SG 561

  Fly   336 LSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHR-QMSRHSLSEATTPPSHAS 399
            :|:|           .........|..||:    ......|:..|: .|....|:......:...
  Fly   562 VSVG-----------VVVVGGHQQLVGGSM----VGMAGMGTDAHQVGMCHDGLAGTANELTVYD 611

  Fly   400 LMICASNNNNNNNNNNNNGEHKQSSYTSGSPTPTTPTP-PPPRSGVGSTCNTASSSSGFLELLLS 463
            :::|.|..:..|           .|||..........| ..|::|:.||                
  Fly   612 VIMCVSQAHRLN-----------CSYTEELTRELMRRPVTVPQNGIAST---------------- 649

  Fly   464 PDKCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVKCLMPFQTLSKNDQHL 528
               ..|.:::|               ::..|:.........:...|.:.|.:..|...:::||.:
  Fly   650 ---VAESLEFQ---------------KIWLWQQFSARVTPGVQRIVEFAKRVPGFCDFTQDDQLI 696

  Fly   529 LLQESWKELFLLNLAQWTIPLDLTPILESPLIRER--VLQDEA--TQTEMKTIQE-----ILCRF 584
            |::..:.|::|.::|:              ||.|.  .|.|.|  |:.:::.:.:     .|..|
  Fly   697 LIKLGFFEVWLTHVAR--------------LINEATLTLDDGAYLTRQQLEILYDSDFVNALLNF 747

  Fly   585 RQITP----DGSEVGCMKAIALFAPETAGLCDVQPVEMLQDQAQCILSDHVRLRYPRQATRFGRL 645
            .....    ..:|:|...|:.|.|.:.|||.:.:.:    .:|:.::::.:|::..|......:.
  Fly   748 ANTLNAYGLSDTEIGLFSAMVLLASDRAGLSEPKVI----GRARELVAEALRVQILRSRAGSPQA 808

  Fly   646 LLLLPSL 652
            |.|:|:|
  Fly   809 LQLMPAL 815

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsfNP_001260109.1 NR_DBD_TLX 5..98 CDD:143537 39/86 (45%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748 36/199 (18%)
Eip78CNP_001246862.1 NR_DBD_DmE78_like 363..443 CDD:143539 38/83 (46%)
NR_LBD_DmE78_like 659..854 CDD:132739 34/175 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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