DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsf and kni

DIOPT Version :9

Sequence 1:NP_001260109.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001287130.1 Gene:kni / 40287 FlyBaseID:FBgn0001320 Length:434 Species:Drosophila melanogaster


Alignment Length:451 Identity:116/451 - (25%)
Similarity:177/451 - (39%) Gaps:112/451 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHR-NRIYTCKATGDLKGRCPVDKTHRNQCRA 71
            |::..|||||:.::|.|:|.::|:||..||.||.:. :.|..||.    :|:|.:||.:|..|:|
  Fly     5 LMNQTCKVCGEPAAGFHFGAFTCEGCKSFFGRSYNNISTISECKN----EGKCIIDKKNRTTCKA 65

  Fly    72 CRLAKCFQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHAHAAA 136
            |||.||:...|:|...::.|.....|:|..|..|...||||..|...|............:...:
  Fly    66 CRLRKCYNVGMSKGGSRYGRRSNWFKIHCLLQEHEQAAAAAGKAPPLAGGVSVGGAPSASSPVGS 130

  Fly   137 AHHAAVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQQGPA 201
            .|.......||. |||||..             ...|.:..||          |:...|.....:
  Fly   131 PHTPGFGDMAAH-LHHHHQQ-------------QQQQQVPRHP----------HMPLLGYPSYLS 171

  Fly   202 PPAGHLHH----GGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHL 262
            .|:..|..    ||..||  :.|..|.|           :..||.::||.:.:...:...:...:
  Fly   172 DPSAALPFFSMMGGVPHQ--SPFQLPPH-----------LLFPGYHASAAAAAASAADAAYRQEM 223

  Fly   263 LHHNLIAEA---------ASKLPGITATA--------------VAAVVSSTST-----PYASAAQ 299
            ..|....::         ||:.|.:..|:              |.:|.|..|:     |.|..|.
  Fly   224 YKHRQSVDSVESQNRFSPASQPPVVQPTSSARQSPIDVCLEEDVHSVHSHQSSASLLHPIAIRAT 288

  Fly   300 TSSPSSNNHNYSSP-SPSNSIQSISSIGSRSGGGE---------------EG-LSLGSESPRVNV 347
            .::|:|     ||| |.:..:||:|.:...|.|||               || :.|..::.|.:|
  Fly   289 PTTPTS-----SSPLSFAAKMQSLSPVSVCSIGGETTSVVPVHPPTVSAQEGPMDLSMKTSRSSV 348

  Fly   348 ETETPSPSNSPPLSAGSISP--------APTLTTSSGSPQHRQMSRHSLSEATTPPSHASL 400
            .:...|.|....:   .::|        |..|||||.|..|  .:.||   ..|..:||.:
  Fly   349 HSFNDSGSEDQEV---EVAPRRKFYQLEAECLTTSSSSSSH--SAAHS---PNTTTAHAEV 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsfNP_001260109.1 NR_DBD_TLX 5..98 CDD:143537 34/90 (38%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748
kniNP_001287130.1 NR_DBD_like 8..92 CDD:295381 33/87 (38%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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