DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsf and nr2f1b

DIOPT Version :9

Sequence 1:NP_001260109.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_956886.1 Gene:nr2f1b / 393564 ZFINID:ZDB-GENE-040426-1438 Length:389 Species:Danio rerio


Alignment Length:678 Identity:145/678 - (21%)
Similarity:201/678 - (29%) Gaps:362/678 - (53%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACRLA 75
            :.|.||||:|||||||.::|:||..|||||:.||..|||:|..:    ||||:.|||||:.|||.
Zfish    52 VECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLSYTCRANRN----CPVDQHHRNQCQYCRLK 112

  Fly    76 KCFQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHAHAAAAHHA 140
            ||.:..|.::||                                                     
Zfish   113 KCLKVGMRREAV----------------------------------------------------- 124

  Fly   141 AVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQQGPAPPAG 205
                                                                    |:|..||  
Zfish   125 --------------------------------------------------------QRGRMPP-- 131

  Fly   206 HLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHLLHHNLIAE 270
                                                                             
Zfish   132 ----------------------------------------------------------------- 131

  Fly   271 AASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGSRSGGGEEG 335
                                                                             
Zfish   132 ----------------------------------------------------------------- 131

  Fly   336 LSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQMSRHSLSEATTPPSHASL 400
                                |.|                                   .|||.:|
Zfish   132 --------------------NQP-----------------------------------NPSHYAL 141

  Fly   401 MICASNNNNNNNNNNNNGEHKQSS-YTSGSPTPTTPTPPPPRSGVGSTCNTASSSSGFLELLLSP 464
                           .||:|.... |.||..:......|.|.|..|:.|..:.:..|.       
Zfish   142 ---------------TNGDHLNGQCYLSGYISLLLRAEPYPASRYGNQCMQSGNIMGI------- 184

  Fly   465 DKCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVKCLMPFQTLSKNDQHLL 529
                                          |.:.|..|||||.||.|.:.:..|..|...||..|
Zfish   185 ------------------------------ENICELAARLLFSAVEWARNIPFFPDLQITDQVSL 219

  Fly   530 LQESWKELFLLNLAQWTIPLDLTPIL------ESPLIRERVLQDEATQTEMKTIQEILCRFRQIT 588
            |:.:|.|||:||.||.::||.:.|:|      .||:..:||:   |....::..||.:.:.:.:.
Zfish   220 LRLTWSELFVLNAAQSSMPLHVAPLLAAAGLHASPMSADRVV---AFMDHIRFFQEQVEKLKALQ 281

  Fly   589 PDGSEVGCMKAIALFAPETAGLCDVQPVEMLQDQAQCILSDHVRLRYPRQATRFGRLLLLLPSLR 653
            .|.:|..|.|||.||..:..||.|:..:|.||:::||.|.::||.:||.|.||||:|||.||:||
Zfish   282 VDSAEYSCAKAIVLFTSDACGLSDIPHIEGLQEKSQCALEEYVRSQYPNQPTRFGKLLLRLPALR 346

  Fly   654 TIRAATIEALFFKETIGNVPIARLLRDM 681
            .:.::.||.|||...:|..||..|:|||
Zfish   347 MVSSSVIEQLFFVRLVGKTPIETLIRDM 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsfNP_001260109.1 NR_DBD_TLX 5..98 CDD:143537 43/86 (50%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748 73/209 (35%)
nr2f1bNP_956886.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..39
NR_DBD_COUP_TF 54..126 CDD:143516 43/184 (23%)
NR_LBD_COUP-TF 152..387 CDD:132746 89/263 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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