Protein Alignment dsf and Rxrb

DIOPT Version :9

• Sequence 1: NP_001260109.1
• Gene: dsf / 33823
• FlyBaseID: FBgn0015381
• Length: 691
• Species: Drosophila melanogaster
• Sequence 2: XP_006256022.1
• Gene: Rxrb / 361801
• RGDID: 3611
• Length: 689
• Species: Rattus norvegicus
• Alignment Length: 684
• Identity: 128/684 - (18%)
• Similarity: 190/684 - (27%)
• Gaps: 360/684 - (52%)

  Fly     4 AGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQ 68
            ||.||    |.:|||||||||||:|||:||.|||||:|.::..|:|:...|    |.|||..||:
  Rat   352 AGKRL----CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKD----CTVDKRQRNR 408

  Fly    69 CRACRLAKCFQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHAH 133
            |:.||..||..:.|.::|||.||...|.|
  Rat   409 CQYCRYQKCLATGMKREAVQEERQRGKDK------------------------------------ 437

  Fly   134 AAAAHHAAVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQQ 198
                                                                             
  Rat   438 ----------------------------------------------------------------- 437

  Fly   199 GPAPPAGHLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHLL 263
                                                             .|.|.|
  Rat   438 -------------------------------------------------DGDGDG---------- 443

  Fly   264 HHNLIAEAASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGSR 328
                                           |..|....|           ....:::..::..:
  Rat   444 -------------------------------AGGAPEEMP-----------VDRILEAELAVEQK 466

  Fly   329 SGGGEEGLSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQMSRHSLSEATT 393
            |..|.||                                 |..|..|||
  Rat   467 SDQGVEG---------------------------------PGGTGGSGS---------------- 482

  Fly   394 PPSHASLMICASNNNNNNNNNNNNGEHKQSSYTSGSPTPTTPTPPPPRSGVGSTCNTASSSSGFL 458
                                                    :|..|     |.:.|..|.
  Rat   483 ----------------------------------------SPNDP-----VTNICQAAD------ 496

  Fly   459 ELLLSPDKCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVKCLMPFQTLSK 523
                                                        :.||..|.|.|.:..|.:|..
  Rat   497 --------------------------------------------KQLFTLVEWAKRIPHFSSLPL 517

  Fly   524 NDQHLLLQESWKELFLLNLAQWTIPLDLTPILESPLIRERVLQDEA------TQTEMKTIQEILC 582
            :||.:||:..|.||.:.:.:..:|.:....:|.:.|...|.....|      .::..:.:.|::.
  Rat   518 DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSRVLTELVS 582

  Fly   583 RFRQITPDGSEVGCMKAIALFAPETAGLCDVQPVEMLQDQAQCILSDHVRLRYPRQATRFGRLLL 647
            :.|.:..|.:|:||::||.||.|:..||.:...||:|:::....|..:.:.:||.|..||.:|||
  Rat   583 KMRDMRMDKTELGCLRAIILFNPDAKGLSNPGEVEILREKVYASLETYCKQKYPEQQGRFAKLLL 647

  Fly   648 LLPSLRTIRAATIEALFFKETIGNVPIARLLRDM 681
            .||:||:|....:|.|||.:.||:.||...|.:|
  Rat   648 RLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 681

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
dsf	NP_001260109.1	NR_DBD_TLX	5..98	CDD:143537	47/92 (51%)
		NR_LBD_Tlx_PNR_like	467..671	CDD:132748	54/209 (26%)
Rxrb	XP_006256022.1	NR_DBD_RXR	356..431	CDD:143514	42/82 (51%)
		NR_LBD_RXR_like	450..667	CDD:132741	68/371 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910