Protein Alignment dsf and Rxrb

DIOPT Version :10

• Sequence 1: NP_477140.1
• Gene: dsf / 33823
• FlyBaseID: FBgn0015381
• Length: 691
• Species: Drosophila melanogaster
• Sequence 2: XP_006256022.2
• Gene: Rxrb / 361801
• RGDID: 3611
• Length: 625
• Species: Rattus norvegicus
• Alignment Length: 684
• Identity: 128/684 - (18%)
• Similarity: 190/684 - (27%)
• Gaps: 360/684 - (52%)

  Fly     4 AGDRLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQ 68
            ||.||    |.:|||||||||||:|||:||.|||||:|.::..|:|:...|    |.|||..||:
  Rat   288 AGKRL----CAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKD----CTVDKRQRNR 344

  Fly    69 CRACRLAKCFQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHAH 133
            |:.||..||..:.|.::|||.||...|.|
  Rat   345 CQYCRYQKCLATGMKREAVQEERQRGKDK------------------------------------ 373

  Fly   134 AAAAHHAAVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQQ 198
                                                                             
  Rat   374 ----------------------------------------------------------------- 373

  Fly   199 GPAPPAGHLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHLL 263
                                                             .|.|.|
  Rat   374 -------------------------------------------------DGDGDG---------- 379

  Fly   264 HHNLIAEAASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGSR 328
                                           |..|....|           ....:::..::..:
  Rat   380 -------------------------------AGGAPEEMP-----------VDRILEAELAVEQK 402

  Fly   329 SGGGEEGLSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQMSRHSLSEATT 393
            |..|.||                                 |..|..|||
  Rat   403 SDQGVEG---------------------------------PGGTGGSGS---------------- 418

  Fly   394 PPSHASLMICASNNNNNNNNNNNNGEHKQSSYTSGSPTPTTPTPPPPRSGVGSTCNTASSSSGFL 458
                                                    :|..|     |.:.|..|.
  Rat   419 ----------------------------------------SPNDP-----VTNICQAAD------ 432

  Fly   459 ELLLSPDKCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVKCLMPFQTLSK 523
                                                        :.||..|.|.|.:..|.:|..
  Rat   433 --------------------------------------------KQLFTLVEWAKRIPHFSSLPL 453

  Fly   524 NDQHLLLQESWKELFLLNLAQWTIPLDLTPILESPLIRERVLQDEA------TQTEMKTIQEILC 582
            :||.:||:..|.||.:.:.:..:|.:....:|.:.|...|.....|      .::..:.:.|::.
  Rat   454 DDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSRVLTELVS 518

  Fly   583 RFRQITPDGSEVGCMKAIALFAPETAGLCDVQPVEMLQDQAQCILSDHVRLRYPRQATRFGRLLL 647
            :.|.:..|.:|:||::||.||.|:..||.:...||:|:::....|..:.:.:||.|..||.:|||
  Rat   519 KMRDMRMDKTELGCLRAIILFNPDAKGLSNPGEVEILREKVYASLETYCKQKYPEQQGRFAKLLL 583

  Fly   648 LLPSLRTIRAATIEALFFKETIGNVPIARLLRDM 681
            .||:||:|....:|.|||.:.||:.||...|.:|
  Rat   584 RLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEM 617

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
dsf	NP_477140.1	NR_DBD_TLX	5..98	CDD:143537	47/92 (51%)
		NR_LBD_Tlx_PNR_like	467..671	CDD:132748	54/209 (26%)
Rxrb	XP_006256022.2	None