DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsf and nr2f1a

DIOPT Version :9

Sequence 1:NP_001260109.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_571255.1 Gene:nr2f1a / 30418 ZFINID:ZDB-GENE-980526-115 Length:411 Species:Danio rerio


Alignment Length:694 Identity:153/694 - (22%)
Similarity:211/694 - (30%) Gaps:368/694 - (53%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GTAGDR--------LLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGR 58
            |||||:        ...|.|.||||:|||||||.::|:||..|||||:.||..|||:|..:    
Zfish    57 GTAGDKGSQNSGQSQQHIECVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYTCRANRN---- 117

  Fly    59 CPVDKTHRNQCRACRLAKCFQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAH 123
            ||:|:.|||||:.|||.||.:..|.::|||..|.|                              
Zfish   118 CPIDQHHRNQCQYCRLKKCLKVGMRREAVQRGRMP------------------------------ 152

  Fly   124 HHHHHHHHAHAAAAHHAAVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSG 188
                                                                             
Zfish   153 ----------------------------------------------------------------- 152

  Fly   189 FHLTASGAQQGPAPPAGHLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPG 253
                       |..|                                   |||            
Zfish   153 -----------PTQP-----------------------------------NPG------------ 159

  Fly   254 STLPFPSHLLHHNLIAEAASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNS 318
                                                      ..|.|:....|.|.|.|      
Zfish   160 ------------------------------------------QYALTNGDPLNGHCYLS------ 176

  Fly   319 IQSISSIGSRSGGGEEGLSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQM 383
                                                                             
Zfish   177 ----------------------------------------------------------------- 176

  Fly   384 SRHSLSEATTPPSHASLMICASNNNNNNNNNNNNGEHKQSSYTSGSPTPTTPTPPPPRSGVGSTC 448
                        .:.||::.|.                                |.|.|..||.|
Zfish   177 ------------GYISLLLRAE--------------------------------PYPTSRYGSQC 197

  Fly   449 NTASSSSGFLELLLSPDKCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVK 513
                         :.|                        :.::..|.:.|..|||||.||.|.:
Zfish   198 -------------MQP------------------------NNIMGIENICELAARLLFSAVEWAR 225

  Fly   514 CLMPFQTLSKNDQHLLLQESWKELFLLNLAQWTIPLDLTPIL------ESPLIRERVLQDEATQT 572
            .:..|..|...||..||:.:|.|||:||.||.::||.:.|:|      .||:..:||:   |...
Zfish   226 NIPFFPDLQITDQVSLLRLTWSELFVLNAAQCSMPLHVAPLLAAAGLHASPMSADRVV---AFMD 287

  Fly   573 EMKTIQEILCRFRQITPDGSEVGCMKAIALFAPETAGLCDVQPVEMLQDQAQCILSDHVRLRYPR 637
            .::..||.:.:.:.:..|.:|..|:|||.||..:..||.|...:|.||:::||.|.::||.:||.
Zfish   288 HIRIFQEQVEKLKALHVDSAEYSCIKAIVLFTSDACGLSDAAHIESLQEKSQCALEEYVRSQYPN 352

  Fly   638 QATRFGRLLLLLPSLRTIRAATIEALFFKETIGNVPIARLLRDM 681
            |.:|||:|||.||||||:.::.||.|||...:|..||..|:|||
Zfish   353 QPSRFGKLLLRLPSLRTVSSSVIEQLFFVRLVGKTPIETLIRDM 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsfNP_001260109.1 NR_DBD_TLX 5..98 CDD:143537 48/100 (48%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748 74/209 (35%)
nr2f1aNP_571255.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..68 5/10 (50%)
gliding_GltJ <11..>59 CDD:411345 1/1 (100%)
NR_DBD_COUP_TF 76..148 CDD:143516 42/75 (56%)
NR_LBD_COUP-TF 174..409 CDD:132746 93/378 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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