Protein Alignment dsf and Hnf4a

DIOPT Version :9

• Sequence 1: NP_001260109.1
• Gene: dsf / 33823
• FlyBaseID: FBgn0015381
• Length: 691
• Species: Drosophila melanogaster
• Sequence 2: XP_006235577.1
• Gene: Hnf4a / 25735
• RGDID: 2810
• Length: 484
• Species: Rattus norvegicus
• Alignment Length: 671
• Identity: 125/671 - (18%)
• Similarity: 182/671 - (27%)
• Gaps: 359/671 - (53%)

  Fly    13 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACRLAKC 77
            |.:||||::|||||..|||||.|||:||:.:|.:|:|:    ...:|.|||..|||||.|||.||
  Rat    60 CAICGDRATGKHYGASSCDGCKGFFRRSVRKNHMYSCR----FSRQCVVDKDKRNQCRYCRLKKC 120

  Fly    78 FQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHAHAAAAHHAAV 142
            |::.|.|:|||:||
  Rat   121 FRAGMKKEAVQNER--------------------------------------------------- 134

  Fly   143 AAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQQGPAPPAGHL 207
                                          ..|||.
  Rat   135 ------------------------------DRISTR----------------------------- 140

  Fly   208 HHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHLLHHNLIAEAA 272
                                               .||                        ...
  Rat   141 -----------------------------------RSS------------------------YED 146

  Fly   273 SKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGSRSGGGEEGLS 337
            |.||.|.|...|.|:|.         |.:||                  ||.|
  Rat   147 SSLPSINALLQAEVLSQ---------QITSP------------------ISGI------------ 172

  Fly   338 LGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQMSRHSLSEATTPPSHASLMI 402
                                                                             
  Rat   173 ----------------------------------------------------------------- 172

  Fly   403 CASNNNNNNNNNNNNGEHKQSSYTSGSPTPTTPTPPPPRSGVGSTCNTASSSSGFLELLLSPDKC 467
                          ||:.:.....:                                   ..|.|
  Rat   173 --------------NGDIRAKRIAN-----------------------------------ITDVC 188

  Fly   468 QELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVKCLMPFQTLSKNDQHLLLQE 532
            :.:            .:|||                   :.|.|.|.:..|..|..:||..||:.
  Rat   189 ESM------------KEQLL-------------------VLVEWAKYIPAFCELLLDDQVALLRA 222

  Fly   533 SWKELFLLNLAQWTIPLDLTPILESPLIRERVLQD--EATQTEMKTIQEILCRFRQITPDGSEVG 595
            ...|..||...:.::......:|.:..|..|...:  |.::..::.:.|::..|:::..|.:|..
  Rat   223 HAGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDDNEYA 287

  Fly   596 CMKAIALFAPETAGLCDVQPVEMLQDQAQCILSDHVRLRYPRQATRFGRLLLLLPSLRTIRAATI 660
            |:|||..|.|:..||.|...::.|:.|.|..|.|::..|......|||.||||||:|::|....|
  Rat   288 CLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPTLQSITWQMI 352

  Fly   661 EALFFKETIGNVPIARLLRDM 681
            |.:.|.:..|...|..||::|
  Rat   353 EQIQFIKLFGMAKIDNLLQEM 373

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
dsf	NP_001260109.1	NR_DBD_TLX	5..98	CDD:143537	45/84 (54%)
		NR_LBD_Tlx_PNR_like	467..671	CDD:132748	53/205 (26%)
Hnf4a	XP_006235577.1	NR_DBD_HNF4A	60..135	CDD:143518	45/159 (28%)
		NR_LBD_HNF4_like	151..373	CDD:132729	71/405 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910