Protein Alignment dsf and Rxra

DIOPT Version :10

• Sequence 1: NP_477140.1
• Gene: dsf / 33823
• FlyBaseID: FBgn0015381
• Length: 691
• Species: Drosophila melanogaster
• Sequence 2: XP_063139210.1
• Gene: Rxra / 25271
• RGDID: 3610
• Length: 511
• Species: Rattus norvegicus
• Alignment Length: 676
• Identity: 122/676 - (18%)
• Similarity: 186/676 - (27%)
• Gaps: 363/676 - (53%)

  Fly    13 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACRLAKC 77
            |.:|||||||||||:|||:||.|||||::.::..|||:...|    |.:||..||:|:.||..||
  Rat   184 CAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKD----CLIDKRQRNRCQYCRYQKC 244

  Fly    78 FQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHAHAAAAHHAAV 142
            ....|.::|||.||
  Rat   245 LAMGMKREAVQEER--------------------------------------------------- 258

  Fly   143 AAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQQGPAPPAGHL 207
                                                                  |:|
  Rat   259 ------------------------------------------------------QRG-------- 261

  Fly   208 HHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHLLHHNLIAEAA 272
                                                                             
  Rat   262 ----------------------------------------------------------------- 261

  Fly   273 SKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGSRSGGGEEGLS 337
                                           ...|.|
  Rat   262 -------------------------------KDRNEN---------------------------- 267

  Fly   338 LGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQMSRHSLSEATTPPSHASLMI 402
                      |.|:.|.:|                        ..|....:.|       |.|.:
  Rat   268 ----------EVESTSSAN------------------------EDMPVEKILE-------AELAV 291

  Fly   403 CASNNNNNNNNNNNNGEHKQSSYTSGSP--TPTTPTPPPPRSGVGSTCNTASSSSGFLELLLSPD 465
                            |.|..:|...:.  .|::|..|     |.:.|..|.
  Rat   292 ----------------EPKTETYVEANMGLNPSSPNDP-----VTNICQAAD------------- 322

  Fly   466 KCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVKCLMPFQTLSKNDQHLLL 530
                                                 :.||..|.|.|.:..|..|..:||.:||
  Rat   323 -------------------------------------KQLFTLVEWAKRIPHFSELPLDDQVILL 350

  Fly   531 QESWKELFLLNLAQWTIPLDLTPILESPLIRERVLQDEATQTEM-----KTIQEILCRFRQITPD 590
            :..|.||.:.:.:..:|.:....:|.:.|   .|.::.|....:     :.:.|::.:.|.:..|
  Rat   351 RAGWNELLIASFSHRSIAVKDGILLATGL---HVHRNSAHSAGVGAIFDRVLTELVSKMRDMQMD 412

  Fly   591 GSEVGCMKAIALFAPETAGLCDVQPVEMLQDQAQCILSDHVRLRYPRQATRFGRLLLLLPSLRTI 655
            .:|:||::||.||.|::.||.:...||.|:::....|..:.:.:||.|..||.:|||.||:||:|
  Rat   413 KTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRFAKLLLRLPALRSI 477

  Fly   656 RAATIEALFFKETIGNVPIARLLRDM 681
            ....:|.|||.:.||:.||...|.:|
  Rat   478 GLKCLEHLFFFKLIGDTPIDTFLMEM 503

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
dsf	NP_477140.1	NR_DBD_TLX	5..98	CDD:143537	42/84 (50%)
		NR_LBD_Tlx_PNR_like	467..671	CDD:132748	54/208 (26%)
Rxra	XP_063139210.1	None