DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dsf and NR2F6

DIOPT Version :9

Sequence 1:NP_001260109.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_005225.2 Gene:NR2F6 / 2063 HGNCID:7977 Length:404 Species:Homo sapiens


Alignment Length:679 Identity:158/679 - (23%)
Similarity:212/679 - (31%) Gaps:347/679 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACR 73
            |.:.|.||||:|||||||:::|:||..||||||.||..|||::..|    |.:|:.|||||:.||
Human    52 LQVDCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRD----CQIDQHHRNQCQYCR 112

  Fly    74 LAKCFQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHAHAAAAH 138
            |.|||:..|.|:|||..|.|                                             
Human   113 LKKCFRVGMRKEAVQRGRIP--------------------------------------------- 132

  Fly   139 HAAVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQQGPAPP 203
                                                                             
Human   133 ----------------------------------------------------------------- 132

  Fly   204 AGHLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHLLHHNLI 268
                                   |:||           |..:|.|||.|||.|.         .:
Human   133 -----------------------HSLP-----------GAVAASSGSPPGSALA---------AV 154

  Fly   269 AEAASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGSRSGGGE 333
            |......||...:.:.|.: ..:.||.:||                        ...|  :|||.
Human   155 ASGGDLFPGQPVSELIAQL-LRAEPYPAAA------------------------GRFG--AGGGA 192

  Fly   334 EGLSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQMSRHSLSEATTPPSHA 398
            .|..||.::                                                        
Human   193 AGAVLGIDN-------------------------------------------------------- 201

  Fly   399 SLMICASNNNNNNNNNNNNGEHKQSSYTSGSPTPTTPTPPPPRSGVGSTCNTASSSSGFLELLLS 463
               :|                                                            
Human   202 ---VC------------------------------------------------------------ 203

  Fly   464 PDKCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVKCLMPFQTLSKNDQHL 528
                                               |..|||||..|.|.:....|..|...||..
Human   204 -----------------------------------ELAARLLFSTVEWARHAPFFPELPVADQVA 233

  Fly   529 LLQESWKELFLLNLAQWTIPLDLTPIL------ESPLIRERVLQDEATQTEMKTIQEILCRFRQI 587
            ||:.||.|||:||.||..:||...|:|      .:|:..||.:   |...:::..||.:.:..::
Human   234 LLRLSWSELFVLNAAQAALPLHTAPLLAAAGLHAAPMAAERAV---AFMDQVRAFQEQVDKLGRL 295

  Fly   588 TPDGSEVGCMKAIALFAPETAGLCDVQPVEMLQDQAQCILSDHVRLRYPRQATRFGRLLLLLPSL 652
            ..|.:|.||:||||||.|:..||.|...||.||::||..|:::||.:||.|..|||||||.||:|
Human   296 QVDSAEYGCLKAIALFTPDACGLSDPAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPAL 360

  Fly   653 RTIRAATIEALFFKETIGNVPIARLLRDM 681
            |.:.|:.|..|||...:|..||..|:|||
Human   361 RAVPASLISQLFFMRLVGKTPIETLIRDM 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsfNP_001260109.1 NR_DBD_TLX 5..98 CDD:143537 48/88 (55%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748 75/209 (36%)
NR2F6NP_005225.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..49
NR_DBD_COUP_TF 56..128 CDD:143516 44/75 (59%)
NR_LBD_COUP-TF 165..400 CDD:132746 95/409 (23%)
Important for dimerization. /evidence=ECO:0000250 327..404 33/63 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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