Protein Alignment dsf and nhr-41

DIOPT Version :9

• Sequence 1: NP_001260109.1
• Gene: dsf / 33823
• FlyBaseID: FBgn0015381
• Length: 691
• Species: Drosophila melanogaster
• Sequence 2: NP_500073.3
• Gene: nhr-41 / 190865
• WormBaseID: WBGene00022423
• Length: 615
• Species: Caenorhabditis elegans
• Alignment Length: 714
• Identity: 134/714 - (18%)
• Similarity: 202/714 - (28%)
• Gaps: 337/714 - (47%)

  Fly    13 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACRLAKC 77
            |.||||::||:|||..||:||.|||||||.:...|.|::..|    |||.|.|||:|:.|||.||
 Worm   152 CVVCGDKASGRHYGAVSCEGCKGFFKRSIRKRIGYVCRSQKD----CPVTKFHRNRCQYCRLRKC 212

  Fly    78 FQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHAHAAAAHHAAV 142
            ....|..::||.||
 Worm   213 LSMGMRSESVQAER--------------------------------------------------- 226

  Fly   143 AAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQQGPAPPAGHL 207
                                                                             
 Worm   227 ----------------------------------------------------------------- 226

  Fly   208 HHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHLLHHNLIA--- 269
                                           .|..|||.:..:........|.||..:.|::
 Worm   227 -------------------------------RPVNNSSMLCNNDNNQQNTTPEHLSPNLLLSLVK 260

  Fly   270 -EAASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGSRSGGGE 333
             |..:||.|:.|..                   .|       .||....:.|....:...|.|.:
 Worm   261 LEHETKLGGLEALI-------------------KP-------GSPVMLQNTQDYMDVKRESIGED 299

  Fly   334 EGLSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQMSRHSLSEATTPPSHA 398
            |...:|                                                    ..||
 Worm   300 EMTVIG----------------------------------------------------LVPP--- 309

  Fly   399 SLMICASNNNNNNNNNNNNGEHKQSSYTSGSPTPTTPTPPPPRSGVGSTCNTASSSSGFLELLLS 463
                                        |.|||         .|||||: ::.|..||
 Worm   310 ----------------------------SASPT---------SSGVGSS-SSISDDSG------- 329

  Fly   464 PDKCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVKCLMPFQTLSKNDQHL 528
            |....|..::::.     .|....:.|  :.:.:.|.|.||||:.|.:||...  .:|..:....
 Worm   330 PIYTSERARFEIS-----VPLNTQNPR--NHQYISEITTRLLFLTVHFVKDSR--VSLRTSTMEG 385

  Fly   529 LLQESWKELFLLNLAQWTIPLDLTPILESPLIRERVLQDEATQTEMKTIQEI------------L 581
            ||:..|.:|::|.|.|....:.|..:|:: |..:..:..|..|...:..::|            |
 Worm   386 LLKSKWCDLYILALMQTADKIKLGQLLDN-LTNQMAMGMECGQYSAEKFEKISEQMQRLLQLSQL 449

  Fly   582 CRFRQITPDGSEVGCMKAIALFA---------PETAGLCDVQPVEMLQ------DQAQCILSDHV 631
            ...|::|  ..|...:|.|:..|         |||..:..:...|:.:      .....:.::|:
 Worm   450 FASRELT--AVEYAYLKMISFTAQDLPSSMASPETRSVNQMASQELFEYVSSSKSTQNHMSNEHI 512

  Fly   632 RLRYPRQ-----------------ATRFGRLLLLLPSLRTIRAATIEALFFKETIGNVPIARLL 678
            .:.....                 |.||.|:|.|||.||....|||..:||...||.:.|..::
 Worm   513 NVDDSTSEDNDTHVTSQQSSVNIAAERFSRILQLLPCLRWFDPATIVEIFFSGLIGPMSIETII 576

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
dsf	NP_001260109.1	NR_DBD_TLX	5..98	CDD:143537	42/84 (50%)
		NR_LBD_Tlx_PNR_like	467..671	CDD:132748	54/247 (22%)
nhr-41	NP_500073.3	Amelogenin	<6..105	CDD:197891
		NR_DBD_TR2_like	147..233	CDD:143525	44/231 (19%)
		NR_LBD	339..582	CDD:386099	55/250 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S7185
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.860