DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsf and nhr-37

DIOPT Version :9

Sequence 1:NP_001260109.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_504683.1 Gene:nhr-37 / 185727 WormBaseID:WBGene00018412 Length:417 Species:Caenorhabditis elegans


Alignment Length:84 Identity:33/84 - (39%)
Similarity:44/84 - (52%) Gaps:3/84 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 DIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACRL 74
            |..|.||...|:|.|:|..:|..|:.||:|:......|.|| .|:.|  |.:|...|..||.|||
 Worm     4 DKSCLVCKKASNGMHFGALTCRACAAFFRRATVLKLQYKCK-QGNSK--CNIDGRGRYVCRQCRL 65

  Fly    75 AKCFQSAMNKDAVQHERGP 93
            .||....||::.||.:..|
 Worm    66 TKCKAIGMNEEKVQLDYDP 84

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsfNP_001260109.1 NR_DBD_TLX 5..98 CDD:143537 33/84 (39%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748
nhr-37NP_504683.1 ZnF_C4 7..76 CDD:197701 29/71 (41%)
Hormone_recep 189..393 CDD:278530
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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