DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsf and daf-12

DIOPT Version :9

Sequence 1:NP_001260109.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_001024547.1 Gene:daf-12 / 181263 WormBaseID:WBGene00000908 Length:753 Species:Caenorhabditis elegans


Alignment Length:466 Identity:95/466 - (20%)
Similarity:156/466 - (33%) Gaps:172/466 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 GTAGDRLLDI---------PCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKG 57
            |:..|.|||.         .|:||||.::|.::.:.:|:.|..||:|:..|.:.:.|..:.|   
 Worm    98 GSPDDGLLDSSEESRRRQKTCRVCGDHATGYNFNVITCESCKAFFRRNALRPKEFKCPYSED--- 159

  Fly    58 RCPVDKTHRNQCRACRLAKCFQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAA 122
             |.::...|..|:.|||.|||...|.|:.:.:|...|:.|                         
 Worm   160 -CEINSVSRRFCQKCRLRKCFTVGMKKEWILNEEQLRRRK------------------------- 198

  Fly   123 HHHHHHHHHAHAAAAHHAAVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPS 187
                                                .|.:.|.......:|              
 Worm   199 ------------------------------------NSRLNNTGTCNKRSQ-------------- 213

  Fly   188 GFHLTASGAQQGPAPPAGHLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGP 252
                  .|.||.|.         |...|...:.||||.....|.|...:..||..|         
 Worm   214 ------PGNQQSPQ---------GPNQQPHLSPHHPGVAIYPPQPQRPLTINPMDN--------- 254

  Fly   253 GSTLPFPSHLLHHNLIAEAASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSN 317
                    .::|| :.|...:.:|.:           .|.|.|.....:||..::   :|.||.|
 Worm   255 --------QMMHH-MQANRPNAMPQL-----------ISPPGAQPYPLTSPVGSS---ASDSPPN 296

  Fly   318 SIQSISSIGSRSGGGEEGLSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQ 382
            ...::...|.:|..|.:...:...:|       .||.:|.|.:.:|.:    .|:|.    :::|
 Worm   297 RSLTMMHNGEKSPDGYDPNIMAHRAP-------PPSFNNRPKMDSGQV----VLSTE----EYKQ 346

  Fly   383 -MSRHSLSEATTPPSHASLMICASNNNNNNNNNNNNGEHKQSSYT-SGSPTPTTPTPP--PPRSG 443
             :||  :..|..|    .||            |.....:|:::|. :|.|.|...|||  .|.|.
 Worm   347 LLSR--IPGAQVP----GLM------------NEEEPINKRAAYNCNGHPMPAETTPPYSAPMSD 393

  Fly   444 VGSTCNTASSS 454
            :..:.:.::||
 Worm   394 MSLSRHNSTSS 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsfNP_001260109.1 NR_DBD_TLX 5..98 CDD:143537 31/101 (31%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748
daf-12NP_001024547.1 NR_DBD_CAR 116..209 CDD:143524 30/157 (19%)
NR_LBD_F1 548..733 CDD:132727
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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