DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment dsf and Nr2f6

DIOPT Version :9

Sequence 1:NP_001260109.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster
Sequence 2:NP_034280.2 Gene:Nr2f6 / 13864 MGIID:1352453 Length:390 Species:Mus musculus


Alignment Length:679 Identity:156/679 - (22%)
Similarity:208/679 - (30%) Gaps:361/679 - (53%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACR 73
            |.:.|.||||:|||||||:::|:||..||||||.||..|||::..|    |.:|:.|||||:.||
Mouse    53 LQVDCVVCGDKSSGKHYGVFTCEGCKSFFKRSIRRNLSYTCRSNRD----CQIDQHHRNQCQYCR 113

  Fly    74 LAKCFQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHAHAAAAH 138
            |.|||:..|.|:|||..|.|                                             
Mouse   114 LKKCFRVGMRKEAVQRGRIP--------------------------------------------- 133

  Fly   139 HAAVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQQGPAPP 203
                            ||:|                    .||..:||.     |:|.:....||
Mouse   134 ----------------HALP--------------------GPAACSPPG-----ATGVEPFTGPP 157

  Fly   204 AGHLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHLLHHNLI 268
            .                                                       |.|:...|.
Mouse   158 V-------------------------------------------------------SELIAQLLR 167

  Fly   269 AEAASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGSRSGGGE 333
            ||                      ||.:|                             .|.||| 
Mouse   168 AE----------------------PYPAA-----------------------------GRFGGG- 180

  Fly   334 EGLSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQMSRHSLSEATTPPSHA 398
                                         |::                                 
Mouse   181 -----------------------------GAV--------------------------------- 183

  Fly   399 SLMICASNNNNNNNNNNNNGEHKQSSYTSGSPTPTTPTPPPPRSGVGSTCNTASSSSGFLELLLS 463
                                                       .|:.:.|               
Mouse   184 -------------------------------------------LGIDNVC--------------- 190

  Fly   464 PDKCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVKCLMPFQTLSKNDQHL 528
                                               |..|||||..|.|.:....|..|...||..
Mouse   191 -----------------------------------ELAARLLFSTVEWARHAPFFPELPAADQVA 220

  Fly   529 LLQESWKELFLLNLAQWTIPLDLTPIL------ESPLIRERVLQDEATQTEMKTIQEILCRFRQI 587
            ||:.||.|||:||.||..:||...|:|      .:|:..||.:   |...:::..||.:.:..::
Mouse   221 LLRLSWSELFVLNAAQAALPLHTAPLLAAAGLHAAPMAAERAV---AFMDQVRAFQEQVDKLGRL 282

  Fly   588 TPDGSEVGCMKAIALFAPETAGLCDVQPVEMLQDQAQCILSDHVRLRYPRQATRFGRLLLLLPSL 652
            ..|.:|.||:||||||.|:..||.|...||.||::||..|:::||.:||.|..|||||||.||:|
Mouse   283 QVDAAEYGCLKAIALFTPDACGLSDPAHVESLQEKAQVALTEYVRAQYPSQPQRFGRLLLRLPAL 347

  Fly   653 RTIRAATIEALFFKETIGNVPIARLLRDM 681
            |.:.|:.|..|||...:|..||..|:|||
Mouse   348 RAVPASLISQLFFMRLVGKTPIETLIRDM 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsfNP_001260109.1 NR_DBD_TLX 5..98 CDD:143537 48/88 (55%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748 75/209 (36%)
Nr2f6NP_034280.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50
NR_DBD_COUP_TF 57..129 CDD:143516 44/75 (59%)
NR_LBD_COUP-TF 157..387 CDD:132746 98/485 (20%)
Important for dimerization. /evidence=ECO:0000250 314..390 33/63 (52%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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