DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsf and nr2e1

DIOPT Version :9

Sequence 1:NP_001260109.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_002937209.2 Gene:nr2e1 / 100491500 XenbaseID:XB-GENE-483554 Length:386 Species:Xenopus tropicalis


Alignment Length:696 Identity:188/696 - (27%)
Similarity:248/696 - (35%) Gaps:344/696 - (49%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRA 71
            |:||||||||||||||||||:|:||||||||||||.|||.|.||:..  :|.|.|||||||||||
 Frog    10 RILDIPCKVCGDRSSGKHYGVYACDGCSGFFKRSIRRNRSYVCKSGN--QGGCLVDKTHRNQCRA 72

  Fly    72 CRLAKCFQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHAHAAA 136
            |||.||.:..|||||||||||||...:..|:                                  
 Frog    73 CRLKKCLEVNMNKDAVQHERGPRTSTIRKQV---------------------------------- 103

  Fly   137 AHHAAVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQQGPA 201
                                                                             
 Frog   104 ----------------------------------------------------------------- 103

  Fly   202 PPAGHLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHLLHHN 266
                             |.:..||                   ..|:||.|    .|||..|   
 Frog   104 -----------------ALYFRGH-------------------KEINGSTP----HFPSAAL--- 125

  Fly   267 LIAEAASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGSRSGG 331
                                                                             
 Frog   126 ----------------------------------------------------------------- 125

  Fly   332 GEEGLSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQMSRHS--LSEATTP 394
                                               ||||..|:..     |:..|:  |:..:|.
 Frog   126 -----------------------------------PAPTFFTTVS-----QLEPHNLELTAISTT 150

  Fly   395 PSHASLMICASNNNNNNNNNNNNGEHKQSSYTSGSPTPTTPTPPPPRSGVGSTCNTASSSSGFLE 459
            |...:|:..|.                             |||..|....|:             
 Frog   151 PERQTLVGLAQ-----------------------------PTPKYPHEVNGA------------- 173

  Fly   460 LLLSPDKCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVKCLMPFQTLSKN 524
                     .|..|:|                 :.|.:.|:.||||||:::|.|.:..|.|||..
 Frog   174 ---------PLYLYEV-----------------ATESVCESAARLLFMSIKWAKSVPAFSTLSLQ 212

  Fly   525 DQHLLLQESWKELFLLNLAQWTIPLDLTPIL----------ESPLIRERVLQDEATQTEMKTIQE 579
            ||.:||:::|:|||:|.:|||.||:|.:.:|          ||..:.:.:       :|::.:||
 Frog   213 DQLMLLEDAWRELFVLGIAQWAIPVDASTLLAVSGMNSDNTESQKLNKII-------SEIQALQE 270

  Fly   580 ILCRFRQITPDGSEVGCMKAIALF--------APETAGLCDVQPVEMLQDQAQCILSDHVRLRYP 636
            ::.||||:..|.:|..|:|.|..|        ..|.....:...:..|||:||..|:.::..|||
 Frog   271 VVSRFRQLRLDATEFACLKCIVTFKAGVPPHSGSELRSFRNAAAIAALQDEAQLTLNSYIHTRYP 335

  Fly   637 RQATRFGRLLLLLPSLRTIRAATIEALFFKETIGNVPIARLLRDMY 682
            .|..|||:||||||:||:|..:|||.:|||:|||||||.|||.|||
 Frog   336 TQPCRFGKLLLLLPALRSINPSTIEEVFFKKTIGNVPITRLLSDMY 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsfNP_001260109.1 NR_DBD_TLX 5..98 CDD:143537 69/90 (77%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748 79/221 (36%)
nr2e1XP_002937209.2 NR_DBD_TLX 8..99 CDD:143537 69/90 (77%)
NR_LBD_Tlx_PNR_like 154..370 CDD:132748 86/290 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H37750
Inparanoid 1 1.050 322 1.000 Inparanoid score I2471
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D373206at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R10591
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.000

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