DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsf and nr3c2

DIOPT Version :9

Sequence 1:NP_001260109.1 Gene:dsf / 33823 FlyBaseID:FBgn0015381 Length:691 Species:Drosophila melanogaster
Sequence 2:XP_031751363.1 Gene:nr3c2 / 100487449 XenbaseID:XB-GENE-483085 Length:985 Species:Xenopus tropicalis


Alignment Length:103 Identity:41/103 - (39%)
Similarity:51/103 - (49%) Gaps:20/103 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIH----RNRIYTCKATGDLKGRCPVDKTHRNQCRACR 73
            |.||||.:||.|||:.:|..|..||||::.    |...|.|....|    |.:||..|..|.|||
 Frog   602 CLVCGDEASGCHYGVVTCGSCKVFFKRAVEGKCSRQHSYLCAGRND----CIIDKIRRKNCPACR 662

  Fly    74 LAKCFQSAMNKDAVQ----------HERGPRKPKLHPQ 101
            |.||.|:.||..|.:          ||..|::|  |.|
 Frog   663 LQKCLQAGMNLGARKSKKLGKLKGVHEEHPQQP--HQQ 698

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsfNP_001260109.1 NR_DBD_TLX 5..98 CDD:143537 39/98 (40%)
NR_LBD_Tlx_PNR_like 467..671 CDD:132748
nr3c2XP_031751363.1 Herpes_BLLF1 <172..>438 CDD:282904
NR_DBD_GR_PR 598..676 CDD:143546 34/77 (44%)
NR_LBD_MR 738..985 CDD:132760
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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