Protein Alignment dsf and Nr2e3

DIOPT Version :10

• Sequence 1: NP_477140.1
• Gene: dsf / 33823
• FlyBaseID: FBgn0015381
• Length: 691
• Species: Drosophila melanogaster
• Sequence 2: NP_001414589.1
• Gene: Nr2e3 / 100365683
• RGDID: 2318602
• Length: 395
• Species: Rattus norvegicus
• Alignment Length: 682
• Identity: 183/682 - (26%)
• Similarity: 235/682 - (34%)
• Gaps: 336/682 - (49%)

  Fly    11 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACRLA 75
            :.|:||||.|||||||||:|:|||||||||:.|..||.|:...   |.|||||.|||||:||||.
  Rat    38 LQCRVCGDSSSGKHYGIYACNGCSGFFKRSVRRRLIYRCQVGA---GMCPVDKAHRNQCQACRLK 99

  Fly    76 KCFQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHAHAAAAHHA 140
            ||.|:.||:||||:||.||.                                      .|..|..
  Rat   100 KCLQAGMNQDAVQNERQPRS--------------------------------------LAQVHLE 126

  Fly   141 AVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQQGPAPPAG 205
            ::                                      .|.:.|....:.||.|..||:|
  Rat   127 SM--------------------------------------EPGSDPRPEPVVASPALAGPSP--- 150

  Fly   206 HLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHLLHHNLIAE 270
                  .|....:|....||                                   |.:...:.||
  Rat   151 ------RGPTSVSAARAMGH-----------------------------------HFMASLISAE 174

  Fly   271 AASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGSRSGGGEEG 335
            ..:||                                      .|.::              ||.
  Rat   175 TCAKL--------------------------------------EPEDA--------------EEN 187

  Fly   336 LSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQMSRHSLSEATTPPSHASL 400
            :.:.|..|      |.|:
  Rat   188 IDVTSNDP------EFPA----------------------------------------------- 199

  Fly   401 MICASNNNNNNNNNNNNGEHKQSSYTSGSPTPTTPTPPPPRSGVGSTCNTASSSSGFLELLLSPD 465
                                                         |.||
  Rat   200 ---------------------------------------------SPCN---------------- 203

  Fly   466 KCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVKCLMPFQTLSKNDQHLLL 530
                                 ||.       :.||:||||||||:|.|.|..|..|...||.:||
  Rat   204 ---------------------LDG-------IHETSARLLFMAVKWAKNLPVFSNLPFRDQVILL 240

  Fly   531 QESWKELFLLNLAQWTIPLDLTPILESPLIRERVLQDEATQT----------EMKTIQEILCRFR 585
            :|:|.|||||...||::|||..|:|..|         ||:.:          ||:.:||.:.|||
  Rat   241 EEAWNELFLLGAIQWSLPLDSCPLLAPP---------EASSSSQGRLALASAEMRFLQETISRFR 296

  Fly   586 QITPDGSEVGCMKAIALFAPETAGLCDVQPVEMLQDQAQCILSDHVRLRYPRQATRFGRLLLLLP 650
            .:..|.:|..|:||:.||.|||.||.|...||.||||:|.:||.|.:..:|.|..|||:||||||
  Rat   297 ALAVDPTEFACLKALVLFKPETRGLKDPDHVEALQDQSQVMLSQHSKAHHPSQPVRFGKLLLLLP 361

  Fly   651 SLRTIRAATIEALFFKETIGNVPIARLLRDMY 682
            |||.|.|..||.|||::||||.|:.:||.||:
  Rat   362 SLRFITAERIELLFFRKTIGNTPMEKLLCDMF 393

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
dsf	NP_477140.1	NR_DBD_TLX	5..98	CDD:143537	56/86 (65%)
		NR_LBD_Tlx_PNR_like	467..671	CDD:132748	91/213 (43%)
Nr2e3	NP_001414589.1	None