Protein Alignment dsf and nr1d1

DIOPT Version :9

• Sequence 1: NP_001260109.1
• Gene: dsf / 33823
• FlyBaseID: FBgn0015381
• Length: 691
• Species: Drosophila melanogaster
• Sequence 2: NP_001093675.1
• Gene: nr1d1 / 100101679
• XenbaseID: XB-GENE-478094
• Length: 522
• Species: Xenopus tropicalis
• Alignment Length: 675
• Identity: 130/675 - (19%)
• Similarity: 202/675 - (29%)
• Gaps: 299/675 - (44%)

  Fly    13 CKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIY-TCKATGDLKGR-CPVDKTHRNQCRACRLA 75
            ||||||.:||.|||:::|:||.|||:|||.:|..| .|     ||.. |.:.:.:||:|:.||..
 Frog   115 CKVCGDVASGFHYGVHACEGCKGFFRRSIQQNIQYKKC-----LKNETCSIVRINRNRCQQCRFR 174

  Fly    76 KCFQSAMNKDAVQHERGPRKPKLHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHAHAAAAHHA 140
            ||....|::|||:..|.|::.|             ....|..|:|..|
 Frog   175 KCLSVGMSRDAVRFGRIPKREK-------------QRMLAEMHSAMNH----------------- 209

  Fly   141 AVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQQGPAPPAG 205
                 .|||                        |.....|.|..|
 Frog   210 -----IASG------------------------HFGRRSPIPLQP-------------------- 225

  Fly   206 HLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHLLHHNLIAE 270
                    ||......||                   :||.:.|:.|          .|
 Frog   226 --------HQQQQQQLHP-------------------SSSPLMGTAP----------CH------ 247

  Fly   271 AASKLPGITATAVAAVVSSTSTP--YASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGSRSGGGE 333
                             |.||.|  |:...|..:|.      .||||.:....||.:
 Frog   248 -----------------SPTSLPDAYSQYPQQLTPP------RSPSPEHMDDVISQV-------- 281

  Fly   334 EGLSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQMSRHSLSEATTPPSHA 398
                                                       |..|||:..::..:.....|..
 Frog   282 -------------------------------------------SMAHRQIFVYANDKVNKKTSWD 303

  Fly   399 SLMICASNNNNNNNNNNN-------NGEHKQSSYTSGSPTPTTPTPPPPRSGVGSTCNTASSSSG 456
            ....|.|::..:::.|:|       |..|:      |.|..:.
 Frog   304 HPQPCWSHDTEDSHGNHNIRLACPMNALHR------GGPVRSV---------------------- 340

  Fly   457 FLELLLSPDKCQELIQYQVQHNTLLFPQQLLDSRLLSWEMLQETTARLLFMAVRWVKCLMPFQTL 521
                       ||:                       ||....:....:...|.:.:.:..|:.|
 Frog   341 -----------QEV-----------------------WEDFSLSFTPAVREVVEFARHIPGFKDL 371

  Fly   522 SKNDQHLLLQESWKELFLLNLAQWTIPLDLTPILESPLIRERVLQ--DEAT----QTEMKTIQEI 580
            ::|||..||:....|:.::..|.         :.::   ||..|:  ..||    :.....:.|:
 Frog   372 TQNDQVTLLKAGTFEVLMVRFAS---------LFDA---REHSLRFLSGATYSLPELHAMGMGEL 424

  Fly   581 LC-------RFRQITPDGSEVGCMKAIALFAPETAGLCDVQPVEMLQDQAQCILSDHVRLRYPRQ 638
            |.       :...::....|:|...|:.|.:.:.:|:.:...||.||:.....|...:....|..
 Frog   425 LSSMFDFSEKLSSLSLSQEELGIFTALVLVSADRSGMENSSLVEQLQETLIRALRSLILKNSPND 489

  Fly   639 ATRFGRLLLLLPSLRTIRAATIEAL 663
            .:||.:|||.||.|||:.....|.|
 Frog   490 TSRFTKLLLRLPDLRTLNNMHSEKL 514

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
dsf	NP_001260109.1	NR_DBD_TLX	5..98	CDD:143537	39/86 (45%)
		NR_LBD_Tlx_PNR_like	467..671	CDD:132748	44/210 (21%)
nr1d1	NP_001093675.1	NR_DBD_REV_ERB	110..198	CDD:143540	40/100 (40%)
		NR_LBD	331..519	CDD:299703	47/258 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910