Protein Alignment dsf and rorc

DIOPT Version :9

• Sequence 1: NP_001260109.1
• Gene: dsf / 33823
• FlyBaseID: FBgn0015381
• Length: 691
• Species: Drosophila melanogaster
• Sequence 2: XP_001344049.3
• Gene: rorc / 100004847
• ZFINID: ZDB-GENE-110411-42
• Length: 480
• Species: Danio rerio
• Alignment Length: 668
• Identity: 124/668 - (18%)
• Similarity: 216/668 - (32%)
• Gaps: 237/668 - (35%)

  Fly    11 IPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRNRIYTCKATGDLKGRCPVDKTHRNQCRACRLA 75
            ||||:|||:|||.|||:.:|:||.|||:||...:..|:|..    :..||:|:..||:|::|||.
Zfish     9 IPCKICGDKSSGVHYGVITCEGCKGFFRRSQSSSVQYSCSR----QSNCPIDRASRNRCQSCRLK 69

  Fly    76 KCFQSAMNKDAVQHERGPRKPK--LHPQLHHHHHHAAAAAAAAHHAAAAHHHHHHHHHAHAAAAH 138
            ||....|::|||:..|..::.:  |..::..|..|....|.:...
Zfish    70 KCVAQGMSRDAVKFGRMSKRQRDSLFAEVERHRQHQRLQANSVQE-------------------- 114

  Fly   139 HAAVAAAAASGLHHHHHAMPVSLVTNVSASFNYTQHISTHPPAPAAPPSGFHLTASGAQQGPAPP 203
                               |..|....|:.....|.....||.|||.|.......:|.   ||..
Zfish   115 -------------------PQPLQAYRSSKDTREQPSHLIPPLPAAYPFSVEPELAGC---PAEV 157

  Fly   204 AGHLHHGGAGHQHATAFHHPGHGHALPAPHGGVVSNPGGNSSAISGSGPGSTLPFPSHLLHHNLI 268
            ..:|      ..|.......|..:.:|.       ..|.|:|..:|.|..||...|..:|:
Zfish   158 IPYL------DCHIVEAQTQGLAYRVPL-------RRGENNSLSAGRGFESTRSTPESILN---- 205

  Fly   269 AEAASKLPGITATAVAAVVSSTSTPYASAAQTSSPSSNNHNYSSPSPSNSIQSISSIGSRSGGGE 333
                     :|.:.:.      ..|:       .|.|:..:|
Zfish   206 ---------MTGSEMG------FHPF-------DPESSFFSY----------------------- 225

  Fly   334 EGLSLGSESPRVNVETETPSPSNSPPLSAGSISPAPTLTTSSGSPQHRQMSRHSLSEATTPPSHA 398
                              |:...:..|:|..|.            .|::.:::.|.|.
Zfish   226 ------------------PTSLQTEELAASIIR------------SHKETTQYRLEEL------- 253

  Fly   399 SLMICASNNNNNNNNNNNNGEHKQSSYTSGSPTPTTPTPPPPRSGVGSTCNTASSSSGFLELLLS 463
                                                                             
Zfish   254 ----------------------------------------------------------------- 253

  Fly   464 PDKCQELIQYQV--QHNTLLFPQQLLDSRLLSWEMLQETTARL---LFMAVRWVKCLMPFQTLSK 523
                 :.::::|  :....::..:.:|      ||.|....||   :...|.:.|.:..|:.|.:
Zfish   254 -----QALRWKVFSREEVHIYQSKPVD------EMWQYCAVRLSDAVQYVVEFAKRIPGFRQLCQ 307

  Fly   524 NDQHLLLQESWKELFLLNLAQWTIPLDLTPILESPLIRERVLQDEATQTEMKTIQEI---LCRFR 585
            |||..||:....|:.|:.:.:.....:.|...:.......:.:..|....:..:.|.   ||..|
Zfish   308 NDQIALLKSGSMEVVLVRMTRMFNTANNTVFFDGKYAGTELFKSLACSDLIAAVFEFANNLCALR 372

  Fly   586 QITPDGSEVGCMKAIALFAPETAGLCDVQPVEMLQDQAQCILSDHVRLRYPRQATRFGRLLLLLP 650
            .   :..::....|:.|..|:...|.|.:.|:.::.:.:..|. |: |....|.:...:|...:|
Zfish   373 L---NEQQMAVFTAMILINPDRPCLEDRERVQRVRTEVELALR-HI-LHRDNQESLLQKLYQRVP 432

  Fly   651 SLRTIRAATIEAL-FFKE 667
            .||::.|..||.| :|::
Zfish   433 VLRSMCALHIEKLQWFRQ 450

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
dsf	NP_001260109.1	NR_DBD_TLX	5..98	CDD:143537	39/88 (44%)
		NR_LBD_Tlx_PNR_like	467..671	CDD:132748	43/210 (20%)
rorc	XP_001344049.3	NR_DBD_ROR	4..98	CDD:143526	40/92 (43%)
		NR_LBD_ROR_like	232..468	CDD:132737	49/319 (15%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910