Sequence 1: | NP_608968.2 | Gene: | bchs / 33819 | FlyBaseID: | FBgn0043362 | Length: | 3489 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038952047.1 | Gene: | Lyst / 85419 | RGDID: | 621837 | Length: | 3840 | Species: | Rattus norvegicus |
Alignment Length: | 4193 | Identity: | 893/4193 - (21%) |
---|---|---|---|
Similarity: | 1421/4193 - (33%) | Gaps: | 1489/4193 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 7 LRGAASAGSVSGS--------SSGTSTANNSSPGSSRTDAGAPTAANGRNAEEALMDARVQVSLT 63
Fly 64 TLKKLFNEYTHPRE--------PLSEQE-----------------RDDKLYEML--PLFCKVFSS 101
Fly 102 CPSNDMSEKFWDVVAFCQQVSRLM--VSEIRKRASNQSTEAASI--AIVKFL--------EVETT 154
Fly 155 EE--TSSGW----------MLLATLNLLANGDVSLIQVMTAAAVPSTLVK--------------C 193
Fly 194 L--------------------------YLFFDLPIVE----------------DDEP---SADGG 213
Fly 214 AVSEFNAHERRTLLQKVFVQL--LVKLCSYPYPAEE--LARMDDLTLLFSAIT---------SPC 265
Fly 266 P---------IHNIVWRKNAAEILTTISRNGLTDAV--------VSYIHSKGCMALCVDNMQRLT 313
Fly 314 FGNPLEIVEMFVTV-----------FCFLKDSSQVSQILMDDFRAS-----QGYVF--LSDFLLK 360
Fly 361 FDNNRSQSLEIQAAIRNLVLMIS------------SLCMCGFYELRPPASQFNTAFKLQNFQLPQ 413
Fly 414 ATSRETCVR----NVYAFQVLQNVFLKSTTPAL-CCTILDAISRVYHSENANYF----------I 463
Fly 464 LESEQTLSSFAERIHMKS------PQIQEKFY-----DLLEFIVFQLNFVPC---KELISLSLLL 514
Fly 515 KHNQSTSCSILCLKTLLNIL----RHNAV----FKDVYREVGILEIFVG-------------CLT 558
Fly 559 R--YA----------------AHVQKI-----------TKGDESVVVELENESEEELFDTLG--- 591
Fly 592 ------KHVLEALTMLLGGGASNNAQL-----------------------------FREYGGAKC 621
Fly 622 VHELVKFKHCRPQALGIVRELILSAGGDD-----DMLHILSLMHSVSPLQVEFKIQILNMLLGCL 681
Fly 682 KDSHRTRTVFRKVGGFVYVTSVFVS-LDGSMALPQPDIPQQDLILLLQIVFQTLATAMRFEPANA 745
Fly 746 K-FFHQEISSSSLCDTLRLLG-----CFGGSSALQDYTGTYEPQQSL--------LKYYHEIFSG 796
Fly 797 DILSVS--FSEDVPYPLSYVCIVFRLLYSIALDNFEAPNLSGIITLFSDPPTTLRSPSKELAPPV 859
Fly 860 HPSQLNLTQP------------------------------SPEP--------------------- 873
Fly 874 -----------RIVHPGVVLCMLQLLPAVEYDMAPLQAVQLQVYLSEIIKSLVRSERNQQIMCDH 927
Fly 928 GLAEKLLKLTRRALAEESHPLHVPMQYILE---RLAAQALQPTELRQFLRLG-EPLSCADIDLQQ 988
Fly 989 PYKLGGPVPLTRIKTLVSMTTPRDFRAHGSSTLPPFVELDMSAEGFGCLYLPSLAPQATA-TAGG 1052
Fly 1053 TIDANSIG---------GIGAGDR-IFPPQ------------------------TGLTYSTWFCV 1083
Fly 1084 EKF-------------------------------------------SDPKTDPHCVRLLTL---- 1101
Fly 1102 --VRTIHNPREENLACLSILLSARD--KAIV---VSTQETLVTPRKSIGDWE---------PEGS 1150
Fly 1151 DD--GIARIWCPDLLHEGQWHNLVVVLNRAVLKNSSLFLYLDGVPMHTQKLHYIAQHPAAGNASL 1213
Fly 1214 TSPTQIFGYIGTPPIWRRYSRLCWKQGVCHLIEDV-LTQQTVQTIYQLGPHYMGSLQAPQLGKQS 1277
Fly 1278 ESLAPLVPEDRVLLGLNAKAVSKLTLVKIRKVYSRADNKSI-----AKQLNMNSHENATPIKILH 1337
Fly 1338 NSAGHLAGAGRS---------LGGVVVGYLGVRVFSP---------------------HPVSAMI 1372
Fly 1373 DTVGGCNVLLGIIAMAQDV----ESLYAGVKALTCVVRSNRAAQAEMDRKRCYQTLGMFFKKKKH 1433
Fly 1434 LLNSHILH-LTFGLVGT----VNSG-------QDMSAIPNVTAFQDLLCDLEIWHNAPNGLLRSL 1486
Fly 1487 LEHLLELV-VESSDKKQNVKIMRDLQLLVKLLHIITQIQDH-------STREILFS---LLETLL 1540
Fly 1541 GGQP---------------------------------RHTDLLLFGQYVAA--KLPHAHSGGLE- 1569
Fly 1570 ----RAVLLPSMKNPAEDQDGGVAQNI--------YLRNRCL-------------SLLHGLLFTP 1609
Fly 1610 RNTVNYVICD---DISKTLGMDWLLLFMQPHVHFTTVIIAVRILVVICANESFLVRFRDATHNG- 1670
Fly 1671 --GYLRFTEMVSQRKMLGL---------GAQQLNQRPTNGTGTVIVATPQNTIQHL----PTQ-- 1718
Fly 1719 ----------------------------------------------------------------- 1718
Fly 1719 ----------IAGEVRAAALNIP-------------------------------GFQLLEWLMNH 1742
Fly 1743 HLDVPELYFLITALIMGQPVKVLATEHTKFDLDRV--------WSFLWGAPV------------- 1786
Fly 1787 ---SANTQLPKLNICPE------------GVCVLLAMVRGI------------------------ 1812
Fly 1813 VHGGECAP-----------------WLHSHPETIIQ-----LLFSLYQNLTDFAPVMMTGDVVTS 1855
Fly 1856 LVAVLFPLA---SRP------ADSEPNSGAST---PTDDTGSSFALPPP--ETLHGAPQPKLTAH 1906
Fly 1907 PVC-NCIID------------------FLRVIVVDSLGLNMQGKPTPVIDLVLDAAPESAELPLQ 1952
Fly 1953 VQYQTQIIIA------------LMDHLLAADVLVGEQAALPLVPLLQSQMQYIAPNVFYLTARIV 2005
Fly 2006 DKLWQGCLARNP--HDIFDFVI---KLIVQAKRRSSS---------LSLEHLHHSLNRSILFLLS 2056
Fly 2057 RPTDDSRADQMSVLEALHKIIQHRLLIFGAGNHELEFIGCLTYCLLQLTADMKIILEPATSRNTT 2121
Fly 2122 WHVNPQ---------TETAEPKDEDLN--QLQGRNLIVGAAFRVWEELYVCKKPAIEEVFKVSLT 2175
Fly 2176 SPPPNSKAPDL-QTTREQVMELASKLWFNYVEAERKATYRAPWELHTQIQSKIQKVTGGLSRLTS 2239
Fly 2240 RTKTKKEELVRTRSTLTREAAYESTGIH----VQLIKDL--LDLRA-KQYQQMLQHTQRYVYQDW 2297
Fly 2298 VQSEMELTRERGLW-----GPTGSCSLDKWILDTTEGPHRMRKKTMRNDVFYLHYPYRPELELAD 2357
Fly 2358 NRQLKYKVASSLDSKTYALHGPQQPRILAEAGEHHAMQQQSSLEAVQSHRLETSSSTSTPPPMVL 2422
Fly 2423 PKLVGHGSTPCPQESVDGNAPEDDEEEEDTSMTSDNETFLRLLEEQEKISFMFRCARVQGLDTFE 2487
Fly 2488 GLLLFGKEHCYIVDGFTLLKNREIRDIDTLPPGAYEPIIPNSGGTSSTTSRAVSHKLRQCS-KFA 2551
Fly 2552 YEEIREVHKRRYLLQPIALEVFSEDGRNYLLSFPRKVRNKVNQRFLALATALNDNAQQSVAGQKR 2616
Fly 2617 TASVEQTAGIFSGLIGETSVTQRWVRGEISNFQYLMHLNTLAGRSYNDLMQYPVFPWILADYDSE 2681
Fly 2682 ELDLTNPKTFRDFSRPMGAQAEER-----------LEQFQKRFKEWDDPHGETPPYHYGTHYSSA 2735
Fly 2736 MIVCSYLVRLEPFSQPFLKLQGGHFDLADRMFHSIKEAWLSASKLNMADVKELIPEFFYLPEFLS 2800
Fly 2801 NFNNFDLGTKQNGETLNHVILPPWAKHDPREFIRLHRSALECDYVSQHLHLWIDLIFGCKQQGPA 2865
Fly 2866 AVDAVNVFHHLFYEGNVDIYNIDDPLKKNATIGFINNFGQIPKQLFKKAHPAKKMGGSRHSALID 2930
Fly 2931 PTSLIQGN---STVLQTDRLFFHNLDNLK----PSLQPIKELKG--------------------- 2967
Fly 2968 PVGQ---ILQ--PDKTVFAVEQNKVMMPPSYTK----------------YIAWGFADHSLRIGLY 3011
Fly 3012 DTDRASFVSEASAQNSGEILTCA-CPNAKMIVTAGTSSVVTIW--KFDANRKS---LAVKHSLHG 3070
Fly 3071 HTDAVTCLAASAAYNVIVSGSRDGTAIVWDMTRFTFVRQLRGHAGVVAAVSINELTGDIAT-CSA 3134
Fly 3135 TW----LHVWSINGDALAMVNTCVGSADRMQQILC-VAFSQIREWDQQNVIITGSTDGVVRMWSL 3194
Fly 3195 EHTQVPIDRKLKRGTEVSSQDKPD---TVSLEG 3224 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
bchs | NP_608968.2 | PH_BEACH | 2469..2600 | CDD:275391 | 31/131 (24%) |
Beach | 2638..2918 | CDD:280327 | 149/290 (51%) | ||
WD40 | <2991..3252 | CDD:225201 | 83/265 (31%) | ||
WD40 | 2995..>3194 | CDD:295369 | 73/226 (32%) | ||
WD40 repeat | 3031..3070 | CDD:293791 | 9/44 (20%) | ||
WD40 repeat | 3075..3111 | CDD:293791 | 16/35 (46%) | ||
FYVE_WDFY3 | 3418..3482 | CDD:277259 | |||
Lyst | XP_038952047.1 | PH_BEACH | 3059..3154 | CDD:405526 | 32/135 (24%) |
Beach | 3171..3461 | CDD:214982 | 150/297 (51%) | ||
WD40 | 3568..3817 | CDD:421866 | 81/251 (32%) | ||
WD40 repeat | 3568..3604 | CDD:293791 | 7/35 (20%) | ||
WD40 repeat | 3608..3653 | CDD:293791 | 9/44 (20%) | ||
WD40 repeat | 3658..3694 | CDD:293791 | 16/35 (46%) | ||
WD40 repeat | 3701..3734 | CDD:293791 | 14/32 (44%) | ||
WD40 repeat | 3744..3785 | CDD:293791 | 18/46 (39%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D101142at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.010 |