DRSC/TRiP Functional Genomics Resources

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Protein Alignment bchs and AT5G18525

DIOPT Version :9

Sequence 1:NP_608968.2 Gene:bchs / 33819 FlyBaseID:FBgn0043362 Length:3489 Species:Drosophila melanogaster
Sequence 2:NP_974804.4 Gene:AT5G18525 / 2745988 AraportID:AT5G18525 Length:1639 Species:Arabidopsis thaliana


Alignment Length:713 Identity:174/713 - (24%)
Similarity:273/713 - (38%) Gaps:207/713 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  2430 STPCPQESVDGN-APEDDEEEEDT--SMTSDN-------ETFLRLL----------EEQEKI--S 2472
            |..|...|..|: |.|||:.|..|  |:|.::       .|...||          .|.:|:  |
plant   102 SDECLDCSTSGSQATEDDDTENITCGSVTCEHSGSFSCWRTVAALLPIAQIRKCSASELQKLASS 166

  Fly  2473 FMFRCARVQGLDTFEGLLLFGKE-----HCY--IVDGFTLLKNREIRDIDTLPPGAYEPIIPNSG 2530
            |.:.|...|.|.:.. .|:.||.     |.:  ::.|..||:.:.  .:..|......|::    
plant   167 FHYECPEDQILASLH-RLIDGKSSGQATHSFLCLLLGLPLLEEKS--KLRCLRHPNLSPVL---- 224

  Fly  2531 GTSSTTSRAVS------HKLRQCSKFAYEEIREVHKRRYLLQPI--------ALEVFSEDGR--N 2579
            |..:::...||      :.|.....::...|:....|.:::..:        .|:|...|.|  |
plant   225 GLLTSSDCLVSVLPKAPYTLENILYYSPSAIKSEWHRNFIIYQLLSALAHLHGLKVSHGDIRPSN 289

  Fly  2580 YLLSFPRKVRNKVNQRFLALATALNDNAQQSV----AGQKRTASVEQTAGIFS-GLIGETSVT-- 2637
            .|||          ....:..|..:.....||    :..:|...||   |.:| ||..:..::  
plant   290 ILLS----------DSLWSWLTIYSKPDLGSVDANSSASRRRWCVE---GCYSYGLYADLKISSH 341

  Fly  2638 -------QRWVRGEISNFQYLMHLNTLAGRSYNDLMQYPVFPWILADYDSEELDLTNPKTFRDF- 2694
                   .:|.:||:|||:||:.||.||||.:.|...:||.||:: |: |::.:..:...:||. 
plant   342 LDWQTHFDKWWKGELSNFEYLLVLNKLAGRRWGDHTFHPVMPWVI-DF-SKKPENDSDSGWRDLR 404

  Fly  2695 -SRPMGAQAEERLEQFQKRFKEWDDPHGETPPYHYGTHYSSAMIVCSYLVRLEPFSQPFLKLQGG 2758
             |:...|:.:|:|:.....|:.         |:|......|.:.||||..|..|.|.        
plant   405 KSKWRLAKGDEQLDFTYSTFEF---------PHHVSDECLSELAVCSYKARRLPLSV-------- 452

  Fly  2759 HFDLADRMFHSIKEAWLSASKLNMADVKELIPEFFYLPEFLSNFNNFDLGTKQNGETLNHVILPP 2823
             ...|.|..:...|......:|......|.||||:..|....:.:          .:::.:.:||
plant   453 -LRKAVRSVYEPNEYPSDMQRLYDWTPDECIPEFYCDPRIFCSLH----------PSMSDLAVPP 506

  Fly  2824 WAKHDPREFIRLHRSALECDYVSQHLHLWIDLIFGCKQQGPAAVDAVNVFHHLFYEGNVDIYNID 2888
            ||. .|.|||||||.|||..:||..:|.|||:.||.|..|.||:.|.||           :.:..
plant   507 WAS-SPDEFIRLHRDALESPHVSSLIHHWIDITFGYKMSGHAAITAKNV-----------MLSSS 559

  Fly  2889 DPLKKNATIGFINNFGQIPKQLFKKAHPAKKMGGSRHSALIDPTSLIQGNSTVLQTDRLFFH--N 2951
            :|.... ::|        .:|||.:.||. ::|.||....       ..|...:.|    ||  .
plant   560 EPTVPR-SVG--------RRQLFFRPHPV-RLGFSREKEQ-------SRNELEMHT----FHGFG 603

  Fly  2952 LDNLKPSLQPIKELKGPVGQILQPDKTVFAVEQNKVMMPPSYTKYIAWGFADHS--------LRI 3008
            :|| |.|:            ||..|:.:...|:             |..|:||:        ||.
plant   604 VDN-KRSV------------ILLADEYLEETEE-------------ASAFSDHATHLCPKYHLRE 642

  Fly  3009 GLYDTDRASFVSEASAQNSGEILTCACPNAKMIVTA--GTSSVVTIWKFDANRKSLAVKHSLH 3069
            .|.::......||               |.|.:.|:  |||          ..|.|:.:.||:
plant   643 NLVESPLHVSYSE---------------NTKKVNTSLPGTS----------KNKGLSSRISLN 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bchsNP_608968.2 PH_BEACH 2469..2600 CDD:275391 29/155 (19%)
Beach 2638..2918 CDD:280327 85/281 (30%)
WD40 <2991..3252 CDD:225201 19/89 (21%)
WD40 2995..>3194 CDD:295369 19/85 (22%)
WD40 repeat 3031..3070 CDD:293791 10/41 (24%)
WD40 repeat 3075..3111 CDD:293791
FYVE_WDFY3 3418..3482 CDD:277259
AT5G18525NP_974804.4 PKc 207..>295 CDD:270622 16/103 (16%)
PKc_like <264..>330 CDD:304357 15/78 (19%)
Beach 349..580 CDD:100117 85/282 (30%)
PKc_like <716..785 CDD:304357
WD40 <1283..1545 CDD:225201
WD40 1291..1571 CDD:295369
WD40 repeat 1296..1336 CDD:293791
WD40 repeat 1341..1375 CDD:293791
WD40 repeat 1416..1456 CDD:293791
WD40 repeat 1463..1510 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1786
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D101142at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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