DRSC/TRiP Functional Genomics Resources

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Protein Alignment bchs and nsmaf

DIOPT Version :9

Sequence 1:NP_608968.2 Gene:bchs / 33819 FlyBaseID:FBgn0043362 Length:3489 Species:Drosophila melanogaster
Sequence 2:NP_001121464.1 Gene:nsmaf / 100158560 XenbaseID:XB-GENE-1003853 Length:917 Species:Xenopus tropicalis


Alignment Length:799 Identity:260/799 - (32%)
Similarity:366/799 - (45%) Gaps:182/799 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly  2510 EIRDIDTLPPGAYE---PIIPNSGGTSSTTSRAVSHKLRQCSKFAY----------------EEI 2555
            ||.|::.    |.|   |::.|.|....|            :||.|                .:|
 Frog   189 EISDMEC----AAEMVTPLVTNPGHVCIT------------NKFLYFQPLNGYPKHVVHINLSDI 237

  Fly  2556 REVHKRRYLLQPIALEVFSEDGRNYLLS-FPRKVRNKVNQRFLALATALNDNAQQSVAGQKRTAS 2619
            |.::|||::|.|:.||||..:  |.|.| ...|..|..::          |:....:|.......
 Frog   238 RRIYKRRHMLMPVGLEVFCTE--NDLCSDIYLKFYNPTDR----------DDLYYYIAAYLENHV 290

  Fly  2620 VEQTAGIFSGLIGETSVTQRWVRGEISNFQYLMHLNTLAGRSYNDLMQYPVFPWILADYDSEELD 2684
            .||||         .|...:|..|.|||:|||:|||.||.||.|||.||||||||:|||.|.:||
 Frog   291 TEQTA---------DSYMLQWQMGHISNYQYLLHLNNLADRSCNDLSQYPVFPWIIADYTSSQLD 346

  Fly  2685 LTNPKTFRDFSRPMGAQAEERLEQFQKRFKEWDDPHGETPPYHYGTHYSSAMIVCSYLVRLEPFS 2749
            ||||:|:||.|:|:||..:||||:..||:.|..|     |.:.||:||||...|..||||:.|  
 Frog   347 LTNPETYRDLSKPIGALNKERLERLLKRYHEMPD-----PKFIYGSHYSSPGYVLFYLVRIAP-- 404

  Fly  2750 QPFLKLQGGHFDLADRMFHSIKEAWLSASKLNMADVKELIPEFFYLPE--FLSNFNNFDLGTKQN 2812
            :..|.||.|.||.|||||:||.:.|.:..: .:.|.|||.|| ||..|  ||.|..:.|||.:|.
 Frog   405 EYMLCLQNGKFDHADRMFNSIGDTWRNCLE-GVTDFKELTPE-FYGNECGFLLNTMHLDLGKRQG 467

  Fly  2813 GETLNHVILPPWAKHDPREFIRLHRSALECDYVSQHLHLWIDLIFGCKQQGPAAVDAVNVFHHLF 2877
            |:.::.|.|||||. |...|::.::.|||..|||.:||.||:|||||||:|..||.|.||||.:.
 Frog   468 GKLVDDVELPPWAS-DADHFLKKNQEALESQYVSDNLHEWINLIFGCKQRGNEAVAANNVFHPVT 531

  Fly  2878 YEGNVDIYNIDDPLKKNATIGFINNFGQIPKQLFKKAHP------AKKMGGSRHSAL-------- 2928
            |||.||:.:|:||.:|.|.:..|..|||.|||||.|.||      :|.|  ||.|:|        
 Frog   532 YEGEVDLNSIEDPDQKVAMLTQILEFGQTPKQLFTKPHPKRIITNSKSM--SRSSSLNVSIADSP 594

  Fly  2929 ------------IDPTSLIQGNSTVLQTDRLFFHNLDNLKPSLQPIK-ELKGPVGQILQPDKT-- 2978
                        .:..||..||.|.|:.:.  .|.:.  |.|:..:. ...|........|.|  
 Frog   595 GSLSEESFEDLTEESKSLAWGNITRLRIES--GHKIH--KESITGVAVSCNGSSVFTTSQDSTLK 655

  Fly  2979 VFAVEQNKVMMPPSYTKYIAWGFA----DHSLRIGLYDTDRASFVSEASAQNSGEIL-------- 3031
            :|:.:|..:....|::.......|    |.::....:| :...|.|.|..:....::        
 Frog   656 MFSADQKSLQRSVSFSNMALSSCAVLPGDMTVMCSSWD-NNVYFYSIAFGRRQDTLMGHDDAVSK 719

  Fly  3032 TCACPNAKMIVTAGTSSVVTIWK------FDANRKSLAVKHSLHGHTDAVTCLAASAAYNVIVSG 3090
            ...|.|  .:.||...|.|.:|.      ....||:..:...|. |...|..::.|:..:|:|||
 Frog   720 IQWCNN--RLCTASWDSTVKVWNCVPADVCGTKRKNFDLLAELE-HDAGVNTISLSSDGSVMVSG 781

  Fly  3091 SRDGTAIVWDMTRFTFVRQLRGHAGVV--AAVS-------------------------INEL-TG 3127
            :::|...:||:...|.:.|:..|:|.|  ||.|                         |:.| :|
 Frog   782 TKEGAVSIWDIGSATMLHQVPCHSGTVYDAAFSPDNRHVLSTGEDGCLKVIDVQTGMLISSLPSG 846

  Fly  3128 DIATCSATW-------------LHVWSINGDALAMVNTCVGSADRMQQILCVAFSQIREW--DQQ 3177
            ::..|.. |             :.||.:.|..:  .....|.:|   .:.|:       |  :..
 Frog   847 EVQRCFC-WNGHTVLSGNDSGEMLVWDLLGGRI--TERVTGHSD---AVTCI-------WMNESC 898

  Fly  3178 NVIITGSTDGVVRMWSLEH 3196
            |.||||..|..:..|.|.:
 Frog   899 NTIITGGMDRQILFWKLHY 917

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bchsNP_608968.2 PH_BEACH 2469..2600 CDD:275391 28/109 (26%)
Beach 2638..2918 CDD:280327 150/287 (52%)
WD40 <2991..3252 CDD:225201 55/267 (21%)
WD40 2995..>3194 CDD:295369 53/259 (20%)
WD40 repeat 3031..3070 CDD:293791 10/52 (19%)
WD40 repeat 3075..3111 CDD:293791 11/35 (31%)
FYVE_WDFY3 3418..3482 CDD:277259
nsmafNP_001121464.1 PH-like 193..282 CDD:302622 26/116 (22%)
Beach 301..572 CDD:280327 150/280 (54%)
WD40 571..>915 CDD:225201 74/366 (20%)
WD40 626..914 CDD:238121 61/306 (20%)
WD40 repeat 633..670 CDD:293791 5/36 (14%)
WD40 repeat 676..712 CDD:293791 6/36 (17%)
WD40 repeat 717..751 CDD:293791 7/35 (20%)
WD40 repeat 767..802 CDD:293791 10/34 (29%)
WD40 repeat 808..844 CDD:293791 5/35 (14%)
WD40 repeat 889..913 CDD:293791 8/30 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D101142at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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