DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrissinR and galr2b

DIOPT Version :9

Sequence 1:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_001339169.1 Gene:galr2b / 798737 ZFINID:ZDB-GENE-131121-48 Length:378 Species:Danio rerio


Alignment Length:532 Identity:120/532 - (22%)
Similarity:191/532 - (35%) Gaps:198/532 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 IEDEEDAEKA-----SEYIFDRTDVRIIFITLYTLVFCCCFFGNLLVILVVTLSRRL-RSITNFF 222
            :.|.||..||     :...:......:|...:::|:|.....||.||:.|:..|.:: .:.||.|
Zfish     1 MSDHEDLNKAMGHWNASESYQLNPASVIVSVVFSLIFLLGTIGNSLVLAVLLRSGQVGYNTTNLF 65

  Fly   223 LANLAFADFCVGLFCVMQNLSIYLIESWVFGEFLCRMYQFVHSLSYTASIFILVVICMERYFAIV 287
            :.||:.|||...:|||....:||.:|.||||.|:|::..|..:|:..||.|.|..:.::||.||.
Zfish    66 ILNLSVADFFFIIFCVPFQATIYSLEGWVFGSFMCKVVHFFINLTMYASSFTLAAVSVDRYLAIR 130

  Fly   288 HPITCKQILTAARLRMVIVTVWITSAVYSTPKFVFSKTIKNIHTQDGQEEEICVLDREMFNSKLL 352
            :|:..:::.|.....:.:|.:|..|.|::.|...:...|      |.:...:||...|..|.|:|
Zfish   131 YPLRSRELRTPCNAVVAMVVIWGLSLVFAGPYLSYYDLI------DFENSNVCVPGWEEHNRKVL 189

  Fly   353 DMINFVLLYVMPLLVMTVLYSKIAIALWRSSRGLTPHVVQHQHQQPQQPSCQDIGMGMHNSMYHH 417
            |...||..||:|:|::::.|::....||.:   :.|                             
Zfish   190 DTCTFVFGYVIPVLIVSLSYTRTIKYLWTA---VDP----------------------------- 222

  Fly   418 HPHHHHHHHQHHQLQSAASSAGVVGVGLGGGGGGGPGPSLASGGSSTTSLSRKQSSKYEKRGVSI 482
                                                                             
Zfish   223 ----------------------------------------------------------------- 222

  Fly   483 TESQLDNCKVSLEADRPIVSACRKTSFYHHGHAHHQRAGNASVGGGSGGAGAGATHMSHSSSNVL 547
                ||.                                                 ||.|.    
Zfish   223 ----LDG-------------------------------------------------MSESK---- 230

  Fly   548 RARRGVVRMLIIFVLTFALCNLPYHARKMWQYWSRSYRGDSNFNA---LLTPLTFLVTYFNSGVN 609
            ||:|.|.:|:||..:.|.:|.||||...:...:     ||..||.   ....|:..:.|.||.:|
Zfish   231 RAKRKVTKMIIIVTVLFCICWLPYHVVILCYLY-----GDFPFNQTTYAFRLLSHCMAYANSCLN 290

  Fly   610 PLLYAFLSRNFRKGMKELLLCSW-KKGKGK---------------SSSNSSMHHKRKALQTHS-- 656
            |::||.:|::||||.|::..|.. |||:.|               .|:..|..::..|.|..|  
Zfish   291 PIVYALVSKHFRKGFKKVFSCILSKKGRNKVHVVNVANTVPGFEAGSTEVSQMNEENARQNESEM 355

  Fly   657 ------LPTDTT 662
                  .|.|||
Zfish   356 VNRPLAQPQDTT 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrissinRNP_001097092.1 7tm_4 191..>327 CDD:304433 45/136 (33%)
7tm_1 201..>385 CDD:278431 61/184 (33%)
galr2bXP_001339169.1 7tmA_Gal2_Gal3_R 27..305 CDD:320225 99/442 (22%)
TM helix 1 29..53 CDD:320225 7/23 (30%)
TM helix 2 63..85 CDD:320225 10/21 (48%)
TM helix 3 101..123 CDD:320225 6/21 (29%)
TM helix 4 146..162 CDD:320225 4/15 (27%)
TM helix 5 187..210 CDD:320225 9/22 (41%)
TM helix 6 237..259 CDD:320225 9/21 (43%)
TM helix 7 273..298 CDD:320225 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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