DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrissinR and prokr1a

DIOPT Version :10

Sequence 1:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001166877.1 Gene:prokr1a / 798080 ZFINID:ZDB-GENE-110411-180 Length:385 Species:Danio rerio


Alignment Length:265 Identity:72/265 - (27%)
Similarity:124/265 - (46%) Gaps:31/265 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 NGSSTDYILLYGESTTSLVPALTTGLSGDGSGAVIEDEEDAEKASEYIFDRTDVRIIFIT--LYT 192
            |.:||       |:.|.:.|      ||.....:.:...|.|...:.|.|.|..|..|:.  :..
Zfish     4 NNTST-------ETWTLIHP------SGSPHDLIYDIPVDYEVPVDEIPDTTQGRAFFVATIVIA 55

  Fly   193 LVFCC----CFFGNLLVILVVTLSRRLRSITNFFLANLAFADFCVGLFCVMQNLSIYLIE--SWV 251
            :|..|    |..||.:.|..:...::||::||..:||||.:||.|...|....:..|:::  ||.
Zfish    56 MVLVCIMLVCGVGNCVFIASLARYKKLRNLTNLLIANLAISDFLVATVCCPFLVDYYVVKRLSWD 120

  Fly   252 FGEFLCRMYQFVHSLSYTASIFILVVICMERYFAIVHPITCKQILTAARLRMVIVTVWITSAVYS 316
            .|..||....::.::|...|...|:.|.::||.|||||:  |..:.......:|..|||...:.:
Zfish   121 HGIVLCVSINYLRTVSLYVSTNALLAIAVDRYMAIVHPL--KPRMKYQTAYWLIFGVWIIPVLIA 183

  Fly   317 TPKFVFSKTIKNIHTQDGQEEEI-CV----LDRE-MFNSKLLDMINFVLLYVMPLLVMTVLYSKI 375
            .|...|:...:..|:....:::| |.    .|:: |:.|..|.:  |::.::.|:..|:|.|::|
Zfish   184 VPSAYFATEHEYPHSTLHHDKKIFCAQIWSADQQLMYRSYFLFI--FIVEFLGPVATMSVCYARI 246

  Fly   376 AIALW 380
            :..||
Zfish   247 SKELW 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrissinRNP_001097092.1 7tmA_Trissin_R 186..624 CDD:320140 58/209 (28%)
TM helix 1 186..212 CDD:320140 7/31 (23%)
TM helix 2 219..244 CDD:320140 10/24 (42%)
TM helix 3 257..287 CDD:320140 8/29 (28%)
TM helix 4 300..321 CDD:320140 5/20 (25%)
TM helix 5 349..378 CDD:320140 8/28 (29%)
TM helix 6 548..578 CDD:320140
TM helix 7 592..617 CDD:320140
prokr1aNP_001166877.1 7tmA_prokineticin-R 52..344 CDD:320332 57/204 (28%)
TM helix 1 53..79 CDD:320332 6/25 (24%)
TM helix 2 86..111 CDD:320332 10/24 (42%)
TM helix 3 126..156 CDD:320332 8/29 (28%)
TM helix 4 167..188 CDD:320332 5/20 (25%)
TM helix 5 220..249 CDD:320332 8/30 (27%)
TM helix 6 268..298 CDD:320332
TM helix 7 312..337 CDD:320332
Blue background indicates that the domain is not in the aligned region.

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