DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrissinR and Kiss1r

DIOPT Version :9

Sequence 1:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_076482.2 Gene:Kiss1r / 78976 RGDID:70930 Length:396 Species:Rattus norvegicus


Alignment Length:544 Identity:107/544 - (19%)
Similarity:172/544 - (31%) Gaps:214/544 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 GESTTSLVPALTTGLSGDGSGAVIEDEEDAEKASEYIFDRTDVRIIFITLYTLVFCCCFFGNLLV 205
            |.:.:...|:..:|..|.|..|     .|...::....|...|.:.|..|..|    ...||.||
  Rat     8 GPNVSWWAPSNASGCPGCGVNA-----SDGPGSAPRPLDAWLVPLFFAALMLL----GLVGNSLV 63

  Fly   206 ILVVTLSRRLRSITNFFLANLAFADFCVGLFCVMQNLSIYLIESWVFGEFLCRMYQFVHSLSYTA 270
            |.|:...:.::::|||::||||..|....|.||.....:|.:.:||.|:|:|:...::..:|..|
  Rat    64 IFVICRHKHMQTVTNFYIANLAATDVTFLLCCVPFTALLYPLPTWVLGDFMCKFVNYIQQVSVQA 128

  Fly   271 SIFILVVICMERYFAIVHPITCKQILTAARLRMVIVTVWITSAVYSTPKFVFSKTIKNIHTQDGQ 335
            :...|..:.::|::..|.|:......|......|.:::|:.||..|.|.....:.....||    
  Rat   129 TCATLTAMSVDRWYVTVFPLRALHRRTPRLALTVSLSIWVGSAAVSAPVLALHRLSPGPHT---- 189

  Fly   336 EEEICVLDREMFNSKLLD----MINFVLLYVMPLLVMTVLYSKIAIALWRSSRGLTPHVVQHQHQ 396
               .|   .|.|.|:.|:    :.|.:.||::|||.....|..               :::|..:
  Rat   190 ---YC---SEAFPSRALERAFALYNLLALYLLPLLATCACYGA---------------MLRHLGR 233

  Fly   397 QPQQPSCQDIGMGMHNSMYHHHPHHHHHHHQHHQLQSAASSAGVVGVGLGGGGGGGPGPSLASGG 461
            ...:|:..|                                            |...|..||   
  Rat   234 AAVRPAPTD--------------------------------------------GALQGQLLA--- 251

  Fly   462 SSTTSLSRKQSSKYEKRGVSITESQLDNCKVSLEADRPIVSACRKTSFYHHGHAHHQRAGNASVG 526
                                                                    ||||     
  Rat   252 --------------------------------------------------------QRAG----- 255

  Fly   527 GGSGGAGAGATHMSHSSSNVLRARRGVVRMLIIFVLTFALCNLP---------------YHAR-- 574
                                 ..|..|.|::...||.||.|..|               :|.|  
  Rat   256 ---------------------AVRTKVSRLVAAVVLLFAACWGPIQLFLVLQALGPSGAWHPRSY 299

  Fly   575 -----KMWQYWSRSYRGDSNFNALLTPLTFLVTYFNSGVNPLLYAFLSRNFRKGMKELLLCSWKK 634
                 |:|.:                    .::|.||.:||||||||..:||:....:..|..::
  Rat   300 AAYALKIWAH--------------------CMSYSNSALNPLLYAFLGSHFRQAFCRVCPCGPQR 344

  Fly   635 GKGKSSSNSSMHHKRKALQTHSLP 658
               :...::|.|..|.|  .||:|
  Rat   345 ---QRRPHASAHSDRAA--PHSVP 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrissinRNP_001097092.1 7tm_4 191..>327 CDD:304433 37/135 (27%)
7tm_1 201..>385 CDD:278431 50/187 (27%)
Kiss1rNP_076482.2 7tmA_KiSS1R 43..334 CDD:320223 91/468 (19%)
TM helix 1 45..69 CDD:320223 10/27 (37%)
TM helix 2 78..100 CDD:320223 10/21 (48%)
TM helix 3 116..138 CDD:320223 3/21 (14%)
TM helix 4 161..177 CDD:320223 5/15 (33%)
TM helix 5 202..225 CDD:320223 6/22 (27%)
TM helix 6 262..284 CDD:320223 7/21 (33%)
TM helix 7 302..327 CDD:320223 12/44 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 346..396 7/20 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
22.010

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