DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrissinR and hcrtr2

DIOPT Version :9

Sequence 1:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001073337.1 Gene:hcrtr2 / 561260 ZFINID:ZDB-GENE-070228-3 Length:424 Species:Danio rerio


Alignment Length:506 Identity:114/506 - (22%)
Similarity:190/506 - (37%) Gaps:147/506 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   166 DEEDAEKAS----EYIFDRTDVRIIFITLYTLVFCCCFFGNLLVILVVTLSRRLRSITNFFLANL 226
            :.||.|...    ||:..: ....:.|..|.|||.....||.||...|..:..:|::||:|:.||
Zfish    33 ENEDDELLKYIWREYLHPK-QYEWVLIAGYILVFLVSLVGNTLVCFAVWKNHHMRTVTNYFIVNL 96

  Fly   227 AFADFCVGLFCVMQNLSIYLIESWVFGEFLCRMYQFVHSLSYTASIFILVVICMERYFAIVHPIT 291
            :|||..|.:.|:..:|.:.:.|:|.||:.||::..::.::|.:.|:..|..|..:|::||.||:.
Zfish    97 SFADILVTITCLPASLVVDITETWFFGQTLCKILPYLQTISVSVSVLTLSCIAQDRWYAICHPLK 161

  Fly   292 CKQILTAARLRMVIVTVWITSAVYSTPKFVFSKTIKNIHTQDGQEEEICVLDREM---FNSKLLD 353
            .|.  ||.|.|..||.:|:.|.:...|:.|..::...:.....:.....|.|.:.   ...|:..
Zfish   162 FKS--TAKRARKSIVLIWLVSCIMMIPQAVVMESSSLMPELTNKTSLFTVCDEQWPDEIYPKVYH 224

  Fly   354 MINFVLLYVMPLLVMTVLYSKIAIALWRSSRGLTPHVVQHQHQQPQQPSCQDIGMGMHNSMYHHH 418
            ...|::.|..||.:|.:.|.:|...||                      ||.|            
Zfish   225 TCFFIVTYFAPLCLMVLAYIQICHKLW----------------------CQQI------------ 255

  Fly   419 PHHHHHHHQHHQLQSAASSAGVVGVGLGGGGGGGPGPSLASGGSSTTSLSRKQSSKYEKRGVSIT 483
                                              ||.|                        |:.
Zfish   256 ----------------------------------PGSS------------------------SVL 262

  Fly   484 ESQLDNCKVSLEADRPIVSACRKTSFYHHGHAHHQRAGNASVGGGSGGAGAGATHMSHSSSNVLR 548
            :.|..:.:.|..|                              .|||.:....|....:.:..::
Zfish   263 QRQWKSLQCSAHA------------------------------VGSGESVKVRTSTVSAEAKQVK 297

  Fly   549 ARRGVVRMLIIFVLTFALCNLPYHARKMWQYWSRSYRGDSNFNALLTPLTF--LVTYFNSGVNPL 611
            |||...|||::.:..||||.||.....:.:....:::...|...:....||  .:.|.||..||:
Zfish   298 ARRKTARMLMVVLFVFALCYLPISILNIMKRVFGAFKNTGNRETVYAWFTFSHWLIYANSAANPI 362

  Fly   612 LYAFLSRNFRKGMKELLLCSW--------KKGKGKSSSNSSMHHKRKALQT 654
            :|.|||..||:..|...:|..        ::.:|::|::|     ||:|.|
Zfish   363 IYNFLSGKFREEFKAAFICQCSGRGETHKQRARGRTSTDS-----RKSLST 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrissinRNP_001097092.1 7tm_4 191..>327 CDD:304433 47/135 (35%)
7tm_1 201..>385 CDD:278431 55/186 (30%)
hcrtr2NP_001073337.1 7tm_4 65..>185 CDD:304433 42/121 (35%)
7tm_1 71..364 CDD:278431 89/416 (21%)
Orexin_rec2 390..>424 CDD:281778 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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