DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrissinR and Galr1

DIOPT Version :9

Sequence 1:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_037090.2 Gene:Galr1 / 50577 RGDID:2656 Length:346 Species:Rattus norvegicus


Alignment Length:492 Identity:98/492 - (19%)
Similarity:163/492 - (33%) Gaps:192/492 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 FITL--YTLVFCCCFFGNLLVILVVTLSR--RLRSITNFFLANLAFADFCVGLFCVMQNLSIYLI 247
            ||||  :.|:|.....||.|||.|:..|:  :.||.||.|:.||:.||....|||:....::|.:
  Rat    33 FITLVVFGLIFAMGVLGNSLVITVLARSKPGKPRSTTNLFILNLSIADLAYLLFCIPFQATVYAL 97

  Fly   248 ESWVFGEFLCRMYQFVHSLSYTASIFILVVICMERYFAIVHPITCKQILTAARLRMVIVTVWITS 312
            .:||.|.|:|:...:..::|...|||.|..:.::||.||||......:..:....:.:..:|..|
  Rat    98 PTWVLGAFICKFIHYFFTVSMLVSIFTLAAMSVDRYVAIVHSRRSSSLRVSRNALLGVGFIWALS 162

  Fly   313 AVYSTPKFVFSKTIKNIHTQDGQEEEICVLDREMFNSKLLDMINFVLLYVMPLLVMTVLYSKIAI 377
            ...::|...:.:    :..:|..:...........:.|...:..||..|::|||::...|:|:. 
  Rat   163 IAMASPVAYYQR----LFHRDSNQTFCWEHWPNQLHKKAYVVCTFVFGYLLPLLLICFCYAKVL- 222

  Fly   378 ALWRSSRGLTPHVVQHQHQQPQQPSCQDIGMGMHNSMYHHHPHHHHHHHQHHQLQSAASSAGVVG 442
                                                           :|.|.:|:          
  Rat   223 -----------------------------------------------NHLHKKLK---------- 230

  Fly   443 VGLGGGGGGGPGPSLASGGSSTTSLSRKQSSKYEKRGVSITESQLDNCKVSLEADRPIVSACRKT 507
                                   ::|:|..:..:|                              
  Rat   231 -----------------------NMSKKSEASKKK------------------------------ 242

  Fly   508 SFYHHGHAHHQRAGNASVGGGSGGAGAGATHMSHSSSNVLRARRGVVRMLIIFVLTFALCNLPYH 572
                                                         ..:.:::.|:.|.:..||:|
  Rat   243 ---------------------------------------------TAQTVLVVVVVFGISWLPHH 262

  Fly   573 ARKMWQYWSRSYRGDSNFNAL-LTPLTFL-------VTYFNSGVNPLLYAFLSRNFRKGMKELLL 629
            ...:|          :.|.|. |||.:|.       :.|.||.|||::|||||.||||..|::..
  Rat   263 VIHLW----------AEFGAFPLTPASFFFRITAHCLAYSNSSVNPIIYAFLSENFRKAYKQVFK 317

  Fly   630 CSWKKGKGKSSSNSSMHHKRKALQTHSLP--TDTTHI 664
            |        ...|.|.|...|.......|  |:.||:
  Rat   318 C--------RVCNESPHGDAKEKNRIDTPPSTNCTHV 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrissinRNP_001097092.1 7tm_4 191..>327 CDD:304433 41/137 (30%)
7tm_1 201..>385 CDD:278431 49/185 (26%)
Galr1NP_037090.2 7tm_1 49..301 CDD:278431 73/421 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 326..346 5/19 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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