DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrissinR and AstA-R2

DIOPT Version :9

Sequence 1:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001263042.1 Gene:AstA-R2 / 43393 FlyBaseID:FBgn0039595 Length:357 Species:Drosophila melanogaster


Alignment Length:439 Identity:94/439 - (21%)
Similarity:150/439 - (34%) Gaps:166/439 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 FFGNLLVILVVTLSRRLRSITNFFLANLAFADFCVGLFCVMQNLSIYLIESWVFGEFLCRMYQFV 263
            |||||||||||..:..:||.||..:.|||.||....:.|:....:.|::..|.:|.|.||..|::
  Fly    53 FFGNLLVILVVVFNNNMRSTTNLMIVNLAAADLMFVILCIPFTATDYMVYYWPYGRFWCRSVQYL 117

  Fly   264 HSLSYTASIFILVVICMERYFAIVHPITCKQILTAARLRMVIVTVWITSAVYSTPKFVFSKTIKN 328
            ..::..|||:.||::.::|:.|:||||..:.:.|.....:.|||:||...|.|.|.......:.:
  Fly   118 IVVTAFASIYTLVLMSIDRFLAVVHPIRSRMMRTENITLIAIVTLWIVVLVVSVPVAFTHDVVVD 182

  Fly   329 IHTQDGQEEEICVL-DREMFNSKLLDMINFVLLYVMPLLVMTVLYSKIAIALWRSSRGLTPHVVQ 392
            ...:......:|.. ..:....:...:..|:..|::||::::.||.::.:.|||...|:      
  Fly   183 YDAKKNITYGMCTFTTNDFLGPRTYQVTFFISSYLLPLMIISGLYMRMIMRLWRQGTGV------ 241

  Fly   393 HQHQQPQQPSCQDIGMGMHNSMYHHHPHHHHHHHQHHQLQSAASSAGVVGVGLGGGGGGGPGPSL 457
                                                                             
  Fly   242 ----------------------------------------------------------------- 241

  Fly   458 ASGGSSTTSLSRKQSSKYEKRGVSITESQLDNCKVSLEADRPIVSACRKTSFYHHGHAHHQRAGN 522
                         :.||..:||                                           
  Fly   242 -------------RMSKESQRG------------------------------------------- 250

  Fly   523 ASVGGGSGGAGAGATHMSHSSSNVLRARRGVVRMLIIFVLTFALCNLPYHARKMWQYWSRSYRGD 587
                                       |:.|.|::::.|:.||...||.....:.:..      |
  Fly   251 ---------------------------RKRVTRLVVVVVIAFASLWLPVQLILLLKSL------D 282

  Fly   588 SNFNALLTPLTFLVT-----YFNSGVNPLLYAFLSRNFRKGMKELLLCS 631
            ......||.|...||     |.:|.:|||||||||.||||...:.:.||
  Fly   283 VIETNTLTKLVIQVTAQTLAYSSSCINPLLYAFLSENFRKAFYKAVNCS 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrissinRNP_001097092.1 7tm_4 191..>327 CDD:304433 48/127 (38%)
7tm_1 201..>385 CDD:278431 56/184 (30%)
AstA-R2NP_001263042.1 7tm_4 47..>164 CDD:304433 43/110 (39%)
7tm_1 55..313 CDD:278431 80/417 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

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