DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrissinR and SIFaR

DIOPT Version :9

Sequence 1:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001163674.1 Gene:SIFaR / 42530 FlyBaseID:FBgn0038880 Length:758 Species:Drosophila melanogaster


Alignment Length:414 Identity:106/414 - (25%)
Similarity:183/414 - (44%) Gaps:86/414 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 LNSDNDDGHHRVVHNQN-------NGSPNS-----SPNQSTSAFRQRQPHHPPTGQQPPRLPCTV 93
            |..|.::..|..|..||       ||:..|     |...|:||.:...                 
  Fly    51 LAGDYNNFTHNFVDLQNLLSFNELNGTSGSGGTAVSSLGSSSAIKLNN----------------- 98

  Fly    94 THFSAHWKTLL--ILLTLL-----SASTLTASANVTSTISPPINGSSTDYILLYGESTTS----- 146
               ||...|||  :|.|..     :||:|.|:...|:|.|  ..||.....|...::|:|     
  Fly    99 ---SAITDTLLGTVLTTATATVAPAASSLLATLAATTTAS--ARGSLAGKSLAIADATSSTYYSN 158

  Fly   147 ---LVPALTTGLSGDGSGAVIEDE----EDAEKASEYIFD-----RTDVRIIFITLYTLVFCCCF 199
               |.||.|:.:|...:.....|.    |..:.:.::.||     ...:.:::...|.:||....
  Fly   159 LLNLSPATTSLISAAAATKSYNDSALRWEQLDGSVDFGFDPLYRHSLAMSMVYCVAYIVVFLVGL 223

  Fly   200 FGNLLVILVVTLSRRLRSITNFFLANLAFADFCVGLFCVMQNLSIYLIESWVFGEFLCRMYQFVH 264
            .||..||.||..:.|:|::||:|:.|||.||..|.:||:...|...:...|:.|..:|:...::.
  Fly   224 IGNSFVIAVVLRAPRMRTVTNYFIVNLAIADILVIVFCLPATLIGNIFVPWMLGWLMCKFVPYIQ 288

  Fly   265 SLSYTASIFILVVICMERYFAIVHPITCKQILTAARLRMVIVTVWITSAVYSTP----------K 319
            .:|..||::.|:.:.::|:.||..|:  || :|..|.|::|:.:|:.:.|.:.|          :
  Fly   289 GVSVAASVYSLIAVSLDRFIAIWWPL--KQ-MTKRRARIMIIGIWVIALVTTIPWLLFFDLVPAE 350

  Fly   320 FVFSKTIKNIHTQDGQEEEICVLDREMF------NSKLLDMINFVLLYVMPLLVMTVLYSKIAIA 378
            .|||..:.:.::   |.:.:|   :|::      |...| :.|.|..|::|:.::|:.|..|.|.
  Fly   351 EVFSDALVSAYS---QPQFLC---QEVWPPGTDGNLYFL-LANLVACYLLPMSLITLCYVLIWIK 408

  Fly   379 LWRSSRGLTPHVVQHQHQQPQQPS 402
            :  |:|.:.......|..:.||.|
  Fly   409 V--STRSIPGESKDAQMDRMQQKS 430

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrissinRNP_001097092.1 7tm_4 191..>327 CDD:304433 46/145 (32%)
7tm_1 201..>385 CDD:278431 57/199 (29%)
SIFaRNP_001163674.1 7tm_4 216..>443 CDD:304433 64/227 (28%)
7tm_1 225..495 CDD:278431 62/218 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24241
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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