DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TrissinR and Hcrtr2

DIOPT Version :9

Sequence 1:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_037206.1 Gene:Hcrtr2 / 25605 RGDID:2788 Length:460 Species:Rattus norvegicus


Alignment Length:566 Identity:124/566 - (21%)
Similarity:204/566 - (36%) Gaps:184/566 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 TASANVTSTISPPINGSSTDYILLYGESTTSLVPALTTGLSGDGSGAVIEDEEDAEKA-SEYIFD 179
            ::::.:..|..|.:|  .|||                            :|||..... .||:..
  Rat    16 SSASELNETQEPFLN--PTDY----------------------------DDEEFLRYLWREYLHP 50

  Fly   180 RTDVRIIFITLYTLVFCCCFFGNLLVILVVTLSRRLRSITNFFLANLAFADFCVGLFCVMQNLSI 244
            : :...:.|..|.:||.....||:||.:.|..:..:|::||:|:.||:.||..|.:.|:...|.:
  Rat    51 K-EYEWVLIAGYIIVFVVALIGNVLVCVAVWKNHHMRTVTNYFIVNLSLADVLVTITCLPATLVV 114

  Fly   245 YLIESWVFGEFLCRMYQFVHSLSYTASIFILVVICMERYFAIVHPITCKQILTAARLRMVIVTVW 309
            .:.|:|.||:.||::..::.::|.:.|:..|..|.::|::||.||:..|.  ||.|.|..||.:|
  Rat   115 DITETWFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAICHPLMFKS--TAKRARNSIVVIW 177

  Fly   310 ITSAVYSTPKFVFSKTIKNIHTQDGQEEEICVLDR----EMFNSKLLDMINFVLLYVMPLLVMTV 370
            |.|.:...|:.:..:....:.....:.....|.|.    |:: .|:..:..|::.|:.||.:|.:
  Rat   178 IVSCIIMIPQAIVMERSSMLPGLANKTTLFTVCDERWGGEVY-PKMYHICFFLVTYMAPLCLMVL 241

  Fly   371 LYSKIAIALWRSSRGLTPHVVQHQHQQPQQPSCQDIGMGMHNSMYHHHPHHHHHHHQHHQLQSAA 435
            .|.:|...||......|..|||.:.:|| ||..|..|.|                          
  Rat   242 AYLQIFRKLWCRQIPGTSSVVQRKWKQP-QPVSQPRGSG-------------------------- 279

  Fly   436 SSAGVVGVGLGGGGGGGPGPSLASGGSSTTSLSRKQSSKYEKRGVSITESQLDNCKVSLEADRPI 500
                                               |.||.....|:....|              
  Rat   280 -----------------------------------QQSKARISAVAAEIKQ-------------- 295

  Fly   501 VSACRKTSFYHHGHAHHQRAGNASVGGGSGGAGAGATHMSHSSSNVLRARRGVVRMLIIFVLTFA 565
                                                          :||||...|||::.:|.||
  Rat   296 ----------------------------------------------IRARRKTARMLMVVLLVFA 314

  Fly   566 LCNLPYHARKMWQYWSRSYRGDSNFNALLTPLTF--LVTYFNSGVNPLLYAFLSRNFRKGMKELL 628
            :|.||.....:.:.....:....:...:....||  .:.|.||..||::|.|||..||:..|...
  Rat   315 ICYLPISILNVLKRVFGMFTHTEDRETVYAWFTFSHWLVYANSAANPIIYNFLSGKFREEFKAAF 379

  Fly   629 LCSW--------KKGKGKSSSNSSMHHKRKALQTHSLPTDTTHIGN 666
            .|..        :..:|::|:.|     ||:|        ||.|.|
  Rat   380 SCCLGVHRRQGDRLARGRTSTES-----RKSL--------TTQISN 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrissinRNP_001097092.1 7tm_4 191..>327 CDD:304433 45/135 (33%)
7tm_1 201..>385 CDD:278431 55/187 (29%)
Hcrtr2NP_037206.1 Required for response to orexin-A. /evidence=ECO:0000250|UniProtKB:O43614 33..49 7/43 (16%)
7tm_4 65..>185 CDD:304433 42/121 (35%)
7tm_1 71..364 CDD:278431 91/417 (22%)
Orexin_rec2 386..443 CDD:281778 10/40 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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