DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrissinR and npr-9

DIOPT Version :9

Sequence 1:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001361821.1 Gene:npr-9 / 191320 WormBaseID:WBGene00013974 Length:431 Species:Caenorhabditis elegans


Alignment Length:542 Identity:110/542 - (20%)
Similarity:177/542 - (32%) Gaps:222/542 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   165 EDEEDAEKASEYIFDRT-----DVRIIFITLYTLVFCCCFFGNLLVILVVTLSRRLRSITNFFLA 224
            |:.|..:|    |:|.|     .:.||..|::.::......||.||: :|...|::|:.||..:.
 Worm     9 EEMEQLQK----IYDDTISFERKIGIIIPTIFAVIILVGLVGNALVV-IVAFGRQMRNSTNTLII 68

  Fly   225 NLAFADFCVGLFCVMQNLSIYLIESWVFGEFLCRMYQFVHSLSYTASIFILVVICMERYFAIVHP 289
            .||.:|....|.||......|...:|:|.|:.|.|..|....|...|::.|.::.::||.|:|:|
 Worm    69 GLAISDLMFLLLCVPFTAVDYAAPTWIFPEWTCSMINFFQHTSAYCSVWTLTLMALDRYLAVVYP 133

  Fly   290 ITCKQILTAARLRMVIVTVWITSAVYSTP----------KFVFSK----TIKNIHTQDGQEEEIC 340
            :....:.|.....:.:..::|.......|          .|:..|    .|..|.|    .|...
 Worm   134 VESMTLRTPRNTVIALCFIYIIIIASQIPVGRMHGIYVYDFIMEKRSTCAILTIAT----AEATP 194

  Fly   341 VLDREMFNSKLLDMINFVLLYVMPLLVMTVLYSKIAIALWRSSRGLTPHVVQHQHQQPQQPSCQD 405
            .:.|..|      |...|..||:||.:..|||..:...||...|                     
 Worm   195 TMARTYF------MTFNVFGYVLPLGISVVLYGLMLRKLWDMPR--------------------- 232

  Fly   406 IGMGMHNSMYHHHPHHHHHHHQHHQLQSAASSAGVVGVGLGGGGGGGPGPSLASGGSSTTSLSRK 470
                                                           ||.|.:.||.:.|:    
 Worm   233 -----------------------------------------------PGNSQSVGGRNLTN---- 246

  Fly   471 QSSKYEKRGVSITESQLDNCKVSLEADRPIVSACRKTSFYHHGHAHHQRAGNASVGGGSGGAGAG 535
                 ...|.||..             ||..:|                                
 Worm   247 -----RDSGSSIRR-------------RPEATA-------------------------------- 261

  Fly   536 ATHMSHSSSNVLRARRGVVRMLIIFVLTFALCNLPYHARKMWQYWSRSYRGDSNFNALLTPLTF- 599
                         |:|.|.|:::..::|:|||.||.                 |....::.|.: 
 Worm   262 -------------AKRKVTRLVLCVLITWALCWLPL-----------------NVCFFMSGLAYP 296

  Fly   600 -------------------LVTYFNSGVNPLLYAFLSRNFRKG----MKELLLCSWKKGKGKSSS 641
                               ::.|.||.:||:|||.:|::||:|    ||.|:.   |..:|:..:
 Worm   297 EPLVISHGVIMVIVQIASQVLAYTNSCLNPILYALMSQSFREGFIRVMKMLIN---KLSRGRFCT 358

  Fly   642 NSSMHHKRKALQTHSLPTDTTH 663
            |    ::|.||:     |:.||
 Worm   359 N----YRRSALR-----TELTH 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrissinRNP_001097092.1 7tm_4 191..>327 CDD:304433 35/149 (23%)
7tm_1 201..>385 CDD:278431 52/197 (26%)
npr-9NP_001361821.1 7tmA_AstA_R_insect 30..340 CDD:320224 91/472 (19%)
TM helix 1 32..56 CDD:320224 6/24 (25%)
TM helix 2 64..86 CDD:320224 7/21 (33%)
TM helix 3 102..124 CDD:320224 5/21 (24%)
TM helix 4 147..163 CDD:320224 1/15 (7%)
TM helix 5 198..221 CDD:320224 10/28 (36%)
TM helix 6 267..289 CDD:320224 8/38 (21%)
TM helix 7 308..333 CDD:320224 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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