DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrissinR and npr-3

DIOPT Version :9

Sequence 1:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_502162.1 Gene:npr-3 / 182494 WormBaseID:WBGene00007006 Length:376 Species:Caenorhabditis elegans


Alignment Length:512 Identity:97/512 - (18%)
Similarity:168/512 - (32%) Gaps:202/512 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 DRTDVRIIFITLYTLVFCCCFFGNLLVILVVTLSRRLRSITNFFLANLAFADFCVGLFCV-MQNL 242
            |...:|.||..||.||:.....||.||:.|:|.::...|:...|:..||.:|..:.||.: :..:
 Worm    20 DMNQIRAIFSLLYLLVWVGAIVGNTLVLYVLTFNQVSLSVRTVFVGCLAGSDLLMCLFSLPITAI 84

  Fly   243 SIYLIESWVFGEFLCRMYQFVHSLSYTASIFILVVICMERYFAIVHPITCKQILTAARLRMVIVT 307
            ||: ...|||....|::.......:...|.|.|.||.::|...|:.|  .::|:...|...::..
 Worm    85 SIF-SRVWVFPAIFCKLIGVFQGGTIFVSSFTLTVIALDRCVLILRP--NQEIVNFPRAVFIVFC 146

  Fly   308 VWITSAVYSTPKFVFSKTIKNIHTQDGQEEEICVLDREM----FN--------SKLLDMINFVLL 360
            :|:.....:.|..::|    :|...|    |||....|.    ||        .:...:...||.
 Worm   147 IWLLGYSLALPVGIYS----DIAVYD----EICGTFCEENWPDFNPDTGRSGIRRAYGLSVLVLQ 203

  Fly   361 YVMPLLVMTVLYSKIAIALWRSSRGLTPHVVQHQHQQPQQPSCQDIGMGMHNSMYHHHPHHHHHH 425
            :.:|.|:.::.|       |..||.::..:.:                                 
 Worm   204 FGIPALISSICY-------WMISRVMSDQLAR--------------------------------- 228

  Fly   426 HQHHQLQSAASSAGVVGVGLGGGGGGGPGPSLASGGSSTTSLSRKQSSKYEKRGVSI---TESQL 487
                                                               :||.:|   :|::|
 Worm   229 ---------------------------------------------------RRGHNIRPESETKL 242

  Fly   488 DNCKVSLEADRPIVSACRKTSFYHHGHAHHQRAGNASVGGGSGGAGAGATHMSHSSSNVLRARRG 552
            .|               |||                                        ||.  
 Worm   243 VN---------------RKT----------------------------------------RAN-- 250

  Fly   553 VVRMLIIFVLTFALCNLPYHARKMWQYWSRSYRGDSNFNALLTPLTFLVTYFNSGVNPLLYAFLS 617
              ||:|:.|:.|.|..:|::|..::    |...|.|.:.:.:..|..:....::.:||::|::.:
 Worm   251 --RMMIVMVVGFVLAWMPFNAVNLY----RDLFGISKWYSTVFALCHVCAMCSAVLNPIIYSWFN 309

  Fly   618 RNFRKGMKELLLCSWKKG-------KGKSSSNSSMHHKRKALQTHSLPTDTTHIGNE 667
            ..||:.:..|.     ||       |.|..|.|.|         .|.||:.:.|..|
 Worm   310 PQFRQSITTLF-----KGTDEARLIKKKPQSTSKM---------VSYPTNFSEIRKE 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrissinRNP_001097092.1 7tm_4 191..>327 CDD:304433 35/136 (26%)
7tm_1 201..>385 CDD:278431 47/196 (24%)
npr-3NP_502162.1 7tmA_NPYR-like 26..314 CDD:320331 81/452 (18%)
TM helix 1 28..52 CDD:320331 10/23 (43%)
TM helix 2 61..83 CDD:320331 6/21 (29%)
TM helix 3 99..121 CDD:320331 5/21 (24%)
TM helix 4 142..158 CDD:320331 1/15 (7%)
TM helix 5 193..216 CDD:320331 5/29 (17%)
TM helix 6 247..272 CDD:320331 11/68 (16%)
TM helix 7 284..309 CDD:320331 4/24 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3389
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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