DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrissinR and LOC110438944

DIOPT Version :9

Sequence 1:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_021328259.1 Gene:LOC110438944 / 110438944 -ID:- Length:383 Species:Danio rerio


Alignment Length:450 Identity:90/450 - (20%)
Similarity:166/450 - (36%) Gaps:163/450 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 IIFITLYTLVFCCCFFGNLLVILVVTLSRRLRS-ITNFFLANLAFADFCVGLFCVMQNLSIYLIE 248
            :|...:::::|.....||.||:.|:..:.::.: .||.|:.||..||.|..:|||....:||.::
Zfish    39 VIISLIFSMIFLVGTVGNCLVLAVLIRNGQMNTKSTNLFILNLGLADLCFIVFCVPLQATIYTMD 103

  Fly   249 SWVFGEFLCRMYQFVHSLSYTASIFILVVICMERYFAIVHPITCKQILTAARLRMVIVTVWITSA 313
            .||||.|:|:...|:..|:..||||.|..:.::||.||.:|:..::..|.......|..||..|.
Zfish   104 EWVFGAFVCKAVHFIIYLTMYASIFTLAAVSLDRYLAIRYPLRSRETRTPRNALTSISLVWALSL 168

  Fly   314 VYSTPKFVFSKTIKNIHTQDGQEEEICVLDREMFNSKLLDMINFVLLYVMPLLVMTVLYSKIAIA 378
            .:|:|...:.:.:      |.....:|:....:.:.:.:|:..|:..|::|:|::.:.|::....
Zfish   169 FFSSPYLSYYQQM------DLDGTTVCIPAWSVHHRQAMDICTFIFGYLIPVLILGITYARTIRY 227

  Fly   379 LWRSSRGLTPHVVQHQHQQPQQPSCQDIGMGMHNSMYHHHPHHHHHHHQHHQLQSAASSAGVVGV 443
            ||.|             ..|.|                                           
Zfish   228 LWTS-------------VDPMQ------------------------------------------- 236

  Fly   444 GLGGGGGGGPGPSLASGGSSTTSLSRKQSSKYEKRGVSITESQLDNCKVSLEADRPIVSACRKTS 508
                                                 .::||:                      
Zfish   237 -------------------------------------DMSESR---------------------- 242

  Fly   509 FYHHGHAHHQRAGNASVGGGSGGAGAGATHMSHSSSNVLRARRGVVRMLIIFVLTFALCNLPYHA 573
                                                   :|:|.|.:|:||..:.|.||.||:|.
Zfish   243 ---------------------------------------KAKRKVTKMIIIVAVLFCLCWLPHHL 268

  Fly   574 RKMWQYWSRSYRGDSNFNALLTPLTFLVTYFNSGVNPLLYAFLSRNFRKGMKELLLCSWK 633
            ..:..::.......:.:  :|..|:.||.|.||.:||::||.:|::||||.|::..|:::
Zfish   269 VILCMWFGHFPLNHTTY--VLRILSHLVAYANSCLNPIVYALVSKHFRKGFKKVFGCAFR 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrissinRNP_001097092.1 7tm_4 191..>327 CDD:304433 44/136 (32%)
7tm_1 201..>385 CDD:278431 54/184 (29%)
LOC110438944XP_021328259.1 7tmA_Gal2_Gal3_R 39..317 CDD:320225 87/439 (20%)
TM helix 1 40..66 CDD:320225 7/25 (28%)
TM helix 2 74..100 CDD:320225 11/25 (44%)
TM helix 3 112..142 CDD:320225 11/29 (38%)
TM helix 4 154..174 CDD:320225 5/19 (26%)
TM helix 5 198..227 CDD:320225 6/28 (21%)
TM helix 6 243..273 CDD:320225 12/29 (41%)
TM helix 7 285..310 CDD:320225 11/26 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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