DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrissinR and galr3

DIOPT Version :9

Sequence 1:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_004913937.2 Gene:galr3 / 100488248 XenbaseID:XB-GENE-5872135 Length:422 Species:Xenopus tropicalis


Alignment Length:504 Identity:102/504 - (20%)
Similarity:174/504 - (34%) Gaps:196/504 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 IEDEEDAEKASEYIFDRTDVRIIFI-----------------------TLYTLVFCCCFFGNLLV 205
            :|.|.|...|:.|  .|..|.|:.:                       .:::|:|.....||.||
 Frog    14 LEKERDGRSAAAY--TRVGVVILLVAEMSQAWNSSVSSELPPGGIIVPVVFSLIFALGTVGNGLV 76

  Fly   206 ILVVTLSRRLR-SITNFFLANLAFADFCVGLFCVMQNLSIYLIESWVFGEFLCRMYQFVHSLSYT 269
            :.|:..:.:.: :.||.|:.||..||.|..|.||....:||.::.|:||.|||:...|...||..
 Frog    77 LAVLLRNGQTKYNTTNLFILNLGVADLCFILLCVPFQATIYTLDGWLFGAFLCKAVHFSIYLSMY 141

  Fly   270 ASIFILVVICMERYFAIVHPITCKQILTAARLRMVIVTVWITSAVYSTPKFVFSKTIKNIHTQDG 334
            ||.|.|..:.::||.||.:|:..:.:.|:......|..:|..|.:::.|...:...|  ::.|  
 Frog   142 ASSFTLAAVSVDRYLAIRYPLKSRDLRTSRNALAAIGVIWALSILFAGPYLSYYHII--LYNQ-- 202

  Fly   335 QEEEICVLDREMFNSKLLDMINFVLLYVMPLLVMTVLYSKIAIALWRSSRGLTPHVVQHQHQQPQ 399
              ..||:.:.|....|::|:..||..|::|:|::.:.|::....||.|   :.|           
 Frog   203 --VPICIPNWEDRRRKIMDVSTFVFGYLLPVLILGLSYARTICFLWTS---VDP----------- 251

  Fly   400 QPSCQDIGMGMHNSMYHHHPHHHHHHHQHHQLQSAASSAGVVGVGLGGGGGGGPGPSLASGGSST 464
                                                                          ..|
 Frog   252 --------------------------------------------------------------VKT 254

  Fly   465 TSLSRKQSSKYEKRGVSITESQLDNCKVSLEADRPIVSACRKTSFYHHGHAHHQRAGNASVGGGS 529
            .|.|||                                                           
 Frog   255 ASESRK----------------------------------------------------------- 260

  Fly   530 GGAGAGATHMSHSSSNVLRARRGVVRMLIIFVLTFALCNLPYHARKMWQYWSRSYRGDSNFNA-- 592
                               |:..|.:|:||..:.|.:|.||:|. .:..:|.    |...||.  
 Frog   261 -------------------AKHKVTKMIIIVAVLFCICWLPHHL-VILCFWF----GHFPFNKAT 301

  Fly   593 -LLTPLTFLVTYFNSGVNPLLYAFLSRNFRKGMKELLLC--SWKKGKGK 638
             ....::..::|.||.:||::||.:|::|||..|::..|  :.|:.:.|
 Frog   302 YAFRLVSHCMSYANSCLNPIVYALISKHFRKRFKQVFTCLLTQKRARNK 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrissinRNP_001097092.1 7tm_4 191..>327 CDD:304433 43/136 (32%)
7tm_1 201..>385 CDD:278431 57/184 (31%)
galr3XP_004913937.2 7tmA_Gal2_Gal3_R 56..334 CDD:320225 90/442 (20%)
TM helix 1 57..83 CDD:320225 7/25 (28%)
TM helix 2 91..117 CDD:320225 11/25 (44%)
TM helix 3 129..159 CDD:320225 11/29 (38%)
TM helix 4 171..191 CDD:320225 3/19 (16%)
TM helix 5 215..244 CDD:320225 8/28 (29%)
TM helix 6 260..290 CDD:320225 11/108 (10%)
TM helix 7 302..327 CDD:320225 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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