DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrissinR and galr2

DIOPT Version :9

Sequence 1:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_002940025.1 Gene:galr2 / 100486593 XenbaseID:XB-GENE-921716 Length:373 Species:Xenopus tropicalis


Alignment Length:490 Identity:111/490 - (22%)
Similarity:179/490 - (36%) Gaps:172/490 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 IIFITLYTLVFCCCFFGNLLVILVVTLSRRLRSITNFFLANLAFADFCVGLFCVMQNLSIYLIES 249
            ::...||:|:|.....||.||:.|:..:.::.:.||.|:.||..||.|..:|||....:||.::|
 Frog    18 VLIPVLYSLIFLVGTVGNSLVLAVLLRNGKVNNTTNLFILNLGVADLCFIIFCVPFQATIYTLDS 82

  Fly   250 WVFGEFLCRMYQFVHSLSYTASIFILVVICMERYFAIVHPITCKQILTAARLRMVIVTVWITSAV 314
            ||||.|:|:...|...|:..||.|.|..:.::||.||.:|:..:::.|.....:.|..:|..|.|
 Frog    83 WVFGPFMCKAVHFFIYLTMYASSFTLTTVSLDRYLAIRYPLRSRELRTPKNALLAITLIWSLSLV 147

  Fly   315 YSTPKFVFSKTIKNIHTQDGQEEEICVLDREMFNS--KLLDMINFVLLYVMPLLVMTVLYSKIAI 377
            :|.|...:        .|:.|...:.|......:|  :.:|:..|...||:|:|::::.|::...
 Frog   148 FSGPYLSY--------YQEFQLSNLTVCHPVWQDSYRRAMDLCTFAFSYVIPVLILSLTYARTIR 204

  Fly   378 ALWRSSRGLTPHVVQHQHQQPQQPSCQDIGMGMHNSMYHHHPHHHHHHHQHHQLQSAASSAGVVG 442
            .||                                                              
 Frog   205 YLW-------------------------------------------------------------- 207

  Fly   443 VGLGGGGGGGPGPSLASGGSSTTSLSRKQSSKYEKRGVSITESQLDNCKVSLEADRPIVSACRKT 507
                                                                .|..||       
 Frog   208 ----------------------------------------------------TAVDPI------- 213

  Fly   508 SFYHHGHAHHQRAGNASVGGGSGGAGAGATHMSHSSSNVLRARRGVVRMLIIFVLTFALCNLPYH 572
                                         ..||.|.    ||:|.|.||:||..:.|.||.||:|
 Frog   214 -----------------------------EDMSESK----RAKRRVTRMIIIVAVLFCLCWLPHH 245

  Fly   573 ARKMWQYWSRSYRGDSNFNALLTPLTFLVTYFNSGVNPLLYAFLSRNFRKGMKELLLCSW--KKG 635
            ...:..::  .|...:||...|..|:.||:|.||.|||::||.:|::||||.:::..|..  ::.
 Frog   246 LVILCVWF--GYFPLNNFTYALRILSHLVSYANSCVNPVVYALVSKHFRKGFRKIFRCLLLRQRA 308

  Fly   636 KGKSSSNSSMHHKRKALQTHSLP-TDTTHIGNEQL 669
            ..|..:..:.|   ..:.||..| |:.|||....|
 Frog   309 ANKVHTAPATH---VGVSTHEGPCTEVTHISEGHL 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrissinRNP_001097092.1 7tm_4 191..>327 CDD:304433 46/135 (34%)
7tm_1 201..>385 CDD:278431 56/185 (30%)
galr2XP_002940025.1 7tmA_Gal2_Gal3_R 18..295 CDD:320225 99/440 (23%)
TM helix 1 19..45 CDD:320225 9/25 (36%)
TM helix 2 52..78 CDD:320225 11/25 (44%)
TM helix 3 90..120 CDD:320225 10/29 (34%)
TM helix 4 132..152 CDD:320225 5/19 (26%)
TM helix 5 176..205 CDD:320225 7/28 (25%)
TM helix 6 221..251 CDD:320225 14/29 (48%)
TM helix 7 263..288 CDD:320225 12/24 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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