DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrissinR and galr2

DIOPT Version :10

Sequence 1:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster
Sequence 2:XP_002940025.1 Gene:galr2 / 100486593 XenbaseID:XB-GENE-921716 Length:373 Species:Xenopus tropicalis


Alignment Length:490 Identity:111/490 - (22%)
Similarity:179/490 - (36%) Gaps:172/490 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 IIFITLYTLVFCCCFFGNLLVILVVTLSRRLRSITNFFLANLAFADFCVGLFCVMQNLSIYLIES 249
            ::...||:|:|.....||.||:.|:..:.::.:.||.|:.||..||.|..:|||....:||.::|
 Frog    18 VLIPVLYSLIFLVGTVGNSLVLAVLLRNGKVNNTTNLFILNLGVADLCFIIFCVPFQATIYTLDS 82

  Fly   250 WVFGEFLCRMYQFVHSLSYTASIFILVVICMERYFAIVHPITCKQILTAARLRMVIVTVWITSAV 314
            ||||.|:|:...|...|:..||.|.|..:.::||.||.:|:..:::.|.....:.|..:|..|.|
 Frog    83 WVFGPFMCKAVHFFIYLTMYASSFTLTTVSLDRYLAIRYPLRSRELRTPKNALLAITLIWSLSLV 147

  Fly   315 YSTPKFVFSKTIKNIHTQDGQEEEICVLDREMFNS--KLLDMINFVLLYVMPLLVMTVLYSKIAI 377
            :|.|...:        .|:.|...:.|......:|  :.:|:..|...||:|:|::::.|::...
 Frog   148 FSGPYLSY--------YQEFQLSNLTVCHPVWQDSYRRAMDLCTFAFSYVIPVLILSLTYARTIR 204

  Fly   378 ALWRSSRGLTPHVVQHQHQQPQQPSCQDIGMGMHNSMYHHHPHHHHHHHQHHQLQSAASSAGVVG 442
            .||                                                              
 Frog   205 YLW-------------------------------------------------------------- 207

  Fly   443 VGLGGGGGGGPGPSLASGGSSTTSLSRKQSSKYEKRGVSITESQLDNCKVSLEADRPIVSACRKT 507
                                                                .|..||       
 Frog   208 ----------------------------------------------------TAVDPI------- 213

  Fly   508 SFYHHGHAHHQRAGNASVGGGSGGAGAGATHMSHSSSNVLRARRGVVRMLIIFVLTFALCNLPYH 572
                                         ..||.|.    ||:|.|.||:||..:.|.||.||:|
 Frog   214 -----------------------------EDMSESK----RAKRRVTRMIIIVAVLFCLCWLPHH 245

  Fly   573 ARKMWQYWSRSYRGDSNFNALLTPLTFLVTYFNSGVNPLLYAFLSRNFRKGMKELLLCSW--KKG 635
            ...:..::  .|...:||...|..|:.||:|.||.|||::||.:|::||||.:::..|..  ::.
 Frog   246 LVILCVWF--GYFPLNNFTYALRILSHLVSYANSCVNPVVYALVSKHFRKGFRKIFRCLLLRQRA 308

  Fly   636 KGKSSSNSSMHHKRKALQTHSLP-TDTTHIGNEQL 669
            ..|..:..:.|   ..:.||..| |:.|||....|
 Frog   309 ANKVHTAPATH---VGVSTHEGPCTEVTHISEGHL 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrissinRNP_001097092.1 7tmA_Trissin_R 186..624 CDD:320140 99/439 (23%)
TM helix 1 186..212 CDD:320140 9/25 (36%)
TM helix 2 219..244 CDD:320140 11/24 (46%)
TM helix 3 257..287 CDD:320140 10/29 (34%)
TM helix 4 300..321 CDD:320140 6/20 (30%)
TM helix 5 349..378 CDD:320140 8/30 (27%)
TM helix 6 548..578 CDD:320140 14/29 (48%)
TM helix 7 592..617 CDD:320140 12/24 (50%)
galr2XP_002940025.1 7tmA_Gal2_Gal3_R 18..295 CDD:320225 99/440 (23%)
TM helix 1 19..45 CDD:320225 9/25 (36%)
TM helix 2 52..78 CDD:320225 11/25 (44%)
TM helix 3 90..120 CDD:320225 10/29 (34%)
TM helix 4 132..152 CDD:320225 5/19 (26%)
TM helix 5 176..205 CDD:320225 7/28 (25%)
TM helix 6 221..251 CDD:320225 14/29 (48%)
TM helix 7 263..288 CDD:320225 12/24 (50%)

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