DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TrissinR and kissr1b

DIOPT Version :9

Sequence 1:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001165295.1 Gene:kissr1b / 100329184 -ID:- Length:367 Species:Xenopus tropicalis


Alignment Length:489 Identity:99/489 - (20%)
Similarity:172/489 - (35%) Gaps:172/489 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 ASEYIFDRTDVRIIFITLYTLVFCCCFF----GNLLVILVVTLSRRLRSITNFFLANLAFADFCV 233
            :|.|..|:|...::...|..|.|.....    ||.|||.|::..|::|::|||::||||..|...
 Frog    30 SSVYGSDQTPPLLVDAWLVPLFFALIMLVGLVGNSLVIYVISKHRQMRTVTNFYIANLATTDITF 94

  Fly   234 GLFCVMQNLSIYLIESWVFGEFLCRMYQFVHSLSYTASIFILVVICMERYFAIVHPITCKQILTA 298
            .:.||....::|.:.|||||:|:||...::..::..|:...|..:.::|.:..|:|:...:..|.
 Frog    95 LVCCVPFTATLYPLPSWVFGDFMCRCVNYLQQVTAQATCITLTAMSVDRCYVTVYPLQSLRHRTP 159

  Fly   299 ARLRMVIVTVWITSAVYSTPKFVFSKTIKNIHTQDGQ---EEEICVLDREMF----NSKLLDMIN 356
            .....|.:.:||.|.|.|.|..::.|      ...|.   .:..|:   |.|    :.|...:..
 Frog   160 RMAMAVSLGIWIGSFVLSIPFAMYQK------LSTGYWYGPQTYCI---EAFPTVLHQKAFILYT 215

  Fly   357 FVLLYVMPLLVMTVLYSKIAIALWRSSRGLTPHVVQHQHQQPQQPSCQDIGMGMHNSMYHHHPHH 421
            |:.:|::|||.:.:.|   |..|.|..|                                     
 Frog   216 FLAVYLLPLLTICICY---AFMLKRMGR------------------------------------- 240

  Fly   422 HHHHHQHHQLQSAASSAGVVGVGLGGGGGGGPGPSLASGGSSTTSLSRKQSSKYEKRGVSITESQ 486
                                                                       .:.|..
 Frog   241 -----------------------------------------------------------PVVEPI 246

  Fly   487 LDNCKVSLEADRPIVSACRKTSFYHHGHAHHQRAGNASVGGGSGGAGAGATHMSHSSSNVLRARR 551
            .:|.:|.|.|:|                                             |..:|.: 
 Frog   247 DNNYQVQLLAER---------------------------------------------SEAMRTK- 265

  Fly   552 GVVRMLIIFVLTFALCNLPYHARKMWQYWSRSYRGDSNFNAL-LTPLTFLVTYFNSGVNPLLYAF 615
             :.||:::.||.|.:|..|.....::|.:..|:  :.::... |......::|.||.:||::|||
 Frog   266 -ISRMVVVIVLLFTICWGPVQLFILFQAFDSSF--EKSYETYKLKIFAHCMSYSNSSINPIVYAF 327

  Fly   616 LSRNFRKGMKELLLCSWK---KGKGKSSSNSSMH 646
            :..||||..|:.....:|   :|.....:|:.||
 Frog   328 MGANFRKSFKKAFPFIFKQRVEGTAGVVANTEMH 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrissinRNP_001097092.1 7tm_4 191..>327 CDD:304433 43/139 (31%)
7tm_1 201..>385 CDD:278431 55/190 (29%)
kissr1bNP_001165295.1 7tm_4 52..>201 CDD:304433 44/157 (28%)
7tm_1 62..325 CDD:278431 79/419 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.