DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrissinR and XB5962511

DIOPT Version :9

Sequence 1:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001096443.1 Gene:XB5962511 / 100125055 XenbaseID:XB-GENE-5962512 Length:369 Species:Xenopus tropicalis


Alignment Length:481 Identity:99/481 - (20%)
Similarity:168/481 - (34%) Gaps:183/481 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 IIFITLYTLVFCCCFFGNLLVILVVTLS-RRLRSITNFFLANLAFADFCVGLFCVMQNLSIYLIE 248
            |:...:::|:|.....||.||:.|:..| :|..:.||.|:.||:.||....:|||....:||.:|
 Frog    27 IVVPVIFSLIFLLGTVGNSLVLAVLLRSGQRTHNTTNLFILNLSVADVSFIIFCVPFQATIYSLE 91

  Fly   249 SWVFGEFLCRMYQFVHSLSYTASIFILVVICMERYFAIVHPITCKQILTAARLRMVIVTVWITSA 313
            .||||.|:|:...|...|:..||.|.|..:.::||.||.:|:..:::.|.......:..:|..|.
 Frog    92 DWVFGAFMCKAVHFFIYLTMYASSFTLAAVSVDRYLAIRYPLRSRELRTPCNAIATMAIIWGLSV 156

  Fly   314 VYSTPKFVFSKTIKNIHTQDGQEEEICVLDREMFNSKLLDMINFVLLYVMPLLVMTVLYSKIAIA 378
            |::.|...:      ....|.:...||:...:....|::|...|::.||:|:|::::.|::....
 Frog   157 VFAGPYLSY------YDLMDYESSHICMPGWKERTRKIMDTGTFIVGYVIPVLIVSLSYTRTIKY 215

  Fly   379 LWRSSRGLTPHVVQHQHQQPQQPSCQDIGMGMHNSMYHHHPHHHHHHHQHHQLQSAASSAGVVGV 443
            ||                                                               
 Frog   216 LW--------------------------------------------------------------- 217

  Fly   444 GLGGGGGGGPGPSLASGGSSTTSLSRKQSSKYEKRGVSITESQLDNCKVSLEADRPIVSACRKTS 508
                              ::...|.....||                                  
 Frog   218 ------------------TAVDPLEDMSESK---------------------------------- 230

  Fly   509 FYHHGHAHHQRAGNASVGGGSGGAGAGATHMSHSSSNVLRARRGVVRMLIIFVLTFALCNLPYHA 573
                                                   :|:|.|.:|:||..:.|.||.||:|.
 Frog   231 ---------------------------------------KAKRKVTKMIIIVTVLFCLCWLPHHV 256

  Fly   574 RKMWQYWSRSYRGDSNFNA---LLTPLTFLVTYFNSGVNPLLYAFLSRNFRKGMKELLLCSW-KK 634
            ..|...:     ||..||.   ....|:..:.|.||.:||::||.:|::||||.:::..|.. ||
 Frog   257 VVMCYLY-----GDFPFNQATYAFRLLSHCMAYANSCLNPIVYALVSKHFRKGFQKVFSCLLRKK 316

  Fly   635 GKGK-------------SSSNSSMHH 647
            |:.|             .:::|.|.|
 Frog   317 GRNKVHVVNAAHAEPGFDAASSEMSH 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrissinRNP_001097092.1 7tm_4 191..>327 CDD:304433 44/136 (32%)
7tm_1 201..>385 CDD:278431 55/184 (30%)
XB5962511NP_001096443.1 7tmA_Gal2_Gal3_R 27..305 CDD:320225 90/442 (20%)
TM helix 1 28..54 CDD:320225 7/25 (28%)
TM helix 2 62..88 CDD:320225 10/25 (40%)
TM helix 3 100..130 CDD:320225 10/29 (34%)
TM helix 4 142..162 CDD:320225 3/19 (16%)
TM helix 5 186..215 CDD:320225 8/28 (29%)
TM helix 6 231..261 CDD:320225 13/29 (45%)
TM helix 7 273..298 CDD:320225 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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