DRSC/TRiP Functional Genomics Resources

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Protein Alignment TrissinR and kiss1rb

DIOPT Version :9

Sequence 1:NP_001097092.1 Gene:TrissinR / 33812 FlyBaseID:FBgn0085410 Length:669 Species:Drosophila melanogaster
Sequence 2:NP_001104001.1 Gene:kiss1rb / 100002715 ZFINID:ZDB-GENE-060526-54 Length:364 Species:Danio rerio


Alignment Length:469 Identity:89/469 - (18%)
Similarity:164/469 - (34%) Gaps:177/469 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 TDVRIIFITLYTLVFCCCFFGNLLVILVVTLSRRLRSITNFFLANLAFADFCVGLFCVMQNLSIY 245
            ||..::.: .:||:......|||:||.||..:::::::||.::.|||..|....:.||....::|
Zfish    40 TDTWLVPL-FFTLIMFVGLVGNLIVIYVVIKNQQMKTVTNLYIVNLATTDILFLVCCVPFTATVY 103

  Fly   246 LIESWVFGEFLCRMYQFVHSLSYTASIFILVVICMERYFAIVHPITCKQILTAARLRMVIVTVWI 310
            ::.||:||:|:||:..::..::..|:...|..:.::|::..|:|:......|......|..|:||
Zfish   104 VLPSWIFGDFMCRLVNYLQQVTAQATCITLSAMSVDRFYVTVYPLQSLHHRTPQMALSVCTTIWI 168

  Fly   311 TSAVYSTPKFVFSKTIKNIHTQDGQ---EEEICVLDREMFNS----KLLDMINFVLLYVMPLLVM 368
            .|::.|.|..::.      ||:...   .:..|.   |.|.|    ::..:.:|:.:|::||:.:
Zfish   169 CSSLLSVPIALYQ------HTESSYWFGPQTYCT---ETFPSVIHKRVYLLYSFLAVYLLPLITI 224

  Fly   369 TVLYSKIAIALWRSSRGLTPHVVQHQHQQPQQPSCQDIGMGMHNSMYHHHPHHHHHHHQHHQLQS 433
            .:.|:               .:::...|...||                                
Zfish   225 CMCYT---------------FMLKRMAQATVQP-------------------------------- 242

  Fly   434 AASSAGVVGVGLGGGGGGGPGPSLASGGSSTTSLSRKQSSKYEKRGVSITESQLDNCKVSLEADR 498
                                                                             
Zfish   243 ----------------------------------------------------------------- 242

  Fly   499 PIVSACRKTSFYHHGHAHHQRAGNASVGGGSGGAGAGATHMSHSSSNVLRARRGVVRMLIIFVLT 563
              |..|.:.|                              :..||......|..|.||:::.||.
Zfish   243 --VQGCNQIS------------------------------LQTSSERAEAVRSRVSRMVVVMVLL 275

  Fly   564 FALCNLPYHARKMWQYW-----SRSYRGDSNFNALLTPLTFL---VTYFNSGVNPLLYAFLSRNF 620
            |.||..|.....:.|.:     ||||        .|..|...   ::|.||.:||::|||:..||
Zfish   276 FLLCWGPIQILILLQAFCAEDVSRSY--------TLYKLKIWAHGMSYSNSSINPVIYAFMGANF 332

  Fly   621 RKGMKELLLCSWKK 634
            ||..:.:....:|:
Zfish   333 RKAFRSVCPLIFKR 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrissinRNP_001097092.1 7tm_4 191..>327 CDD:304433 38/135 (28%)
7tm_1 201..>385 CDD:278431 47/190 (25%)
kiss1rbNP_001104001.1 7tm_1 59..325 CDD:278431 77/426 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1294084at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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