DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9171 and lge-1

DIOPT Version :9

Sequence 1:NP_001162891.1 Gene:CG9171 / 33807 FlyBaseID:FBgn0031738 Length:544 Species:Drosophila melanogaster
Sequence 2:NP_509833.3 Gene:lge-1 / 187206 WormBaseID:WBGene00010716 Length:631 Species:Caenorhabditis elegans


Alignment Length:383 Identity:78/383 - (20%)
Similarity:135/383 - (35%) Gaps:89/383 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 DEKELEERVRSLINCFDHDYHQQTLQRGDFWVLQNYVRAEHGDIKCHESITYTTHADYTFLDNLV 228
            |..:|:.|.||.......|...:.|...:|.::.|.:    |.:.....:...|......|::.:
 Worm   308 DGSDLKRRRRSFKGNNQKDICHEYLPLDNFRIIPNAI----GRMTKPAELCMVTQFSKDRLNHFL 368

  Fly   229 PLLERWNAPVSIAMHAPGTDFQPTLDSIRYLRECLPGSHLVRAYTTFHIYFGTKHIPKSVPKPHE 293
            .....|..|:|.|::....|.   ||..:.:.|      |.|...|.|:.|         .:|.|
 Worm   369 ESANAWRHPISTAVYGKDKDL---LDIAKAVTE------LNRTDITIHLVF---------EEPTE 415

  Fly   294 VFKTGYNCTLPPPYFNVSSGHLYKAQKKLLYPVNVGRNIARDSALTHFILASDIELYPNPGLVKK 358
            .:                       ....|||:|..||:|.:.|...:||.:|::.     :|..
 Worm   416 SW-----------------------MLDSLYPINFLRNVAIEHANCKYILMTDVDF-----VVLG 452

  Fly   359 FLEMIARNEQYLRRKAPRVFPLAIFEVEENSPVPHDKTELQEFLR---------TGKAI-PFHKR 413
            ....|......|::|...|.|..      ....|..:..|..||.         ..|.| .|.:.
 Worm   453 DYGTIIDQTGNLKQKEVLVIPAL------EMTYPQLRLNLSNFLSRKDLVIEHLLNKTIQTFRET 511

  Fly   414 VCASCHGVPKSKEWMSANETDELSVFHIGKRTGYYVHWEPIYIGTHAD-PHYDER---LSWEGKS 474
            :..|.|......:|:.:|.|         ....|..::||.::....: |.||:|   ..|    
 Worm   512 IWPSSHVPTNISKWIKSNRT---------YMVNYEKNYEPYFVIKKEECPFYDQRFGGFGW---- 563

  Fly   475 DKMPQGYALCVMDYEFHILDNAFLVHK--PGIKVLKKDNR----RAMLSGKTNQLIRK 526
            :|:.....|.:|:|:|.:...:|::|:  ...|.||:..|    :..|....|:.::|
 Worm   564 NKVTHVMQLKMMNYKFLVSPTSFMIHQNHNASKSLKRWRRDPHYQKCLHTLKNKFMKK 621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9171NP_001162891.1 Glyco_transf_49 212..536 CDD:290607 68/335 (20%)
lge-1NP_509833.3 GT8_LARGE_C 42..317 CDD:133053 3/8 (38%)
RfaJ 62..>288 CDD:224359
Glyco_transf_49 354..603 CDD:290607 64/313 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158810
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3765
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D729091at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm14638
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5095
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.780

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