DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment obst-E and CG6933

DIOPT Version :10

Sequence 1:NP_723116.1 Gene:obst-E / 33806 FlyBaseID:FBgn0031737 Length:249 Species:Drosophila melanogaster
Sequence 2:NP_730495.1 Gene:CG6933 / 40214 FlyBaseID:FBgn0036952 Length:363 Species:Drosophila melanogaster


Alignment Length:271 Identity:63/271 - (23%)
Similarity:87/271 - (32%) Gaps:90/271 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 LCVAMFGSMALGSPECPTPNGRFASGDQCDSYTECQD------GTPVEKLCPDGLLFHQRTKATG 68
            ||....|...:|:|            ..|.::..|::      ||     ||:||:|:.:   .|
  Fly    41 LCQQWSGYGYIGNP------------SNCHAWGYCKNQEVVAWGT-----CPNGLVFNAQ---AG 85

  Fly    69 ECTYAPYSTCKERA------------RLQPANGTE------------------------------ 91
            .|.||..:.|...|            ...|.|.||                              
  Fly    86 SCDYANTTVCSTSAVETCSNVKSPMYVANPLNCTEYAYCDGTGQISYGDCGTGGVYSASSTKCIW 150

  Fly    92 --ECPR----QFGFYPN---GDATKCGVYRNCAHGVASLTKCPE--GLAFNEETYQCDW--PDLV 143
              .||:    :| ...|   ||..:||.|.||.:|..:..||..  ...:|:.|..|..  |...
  Fly   151 GPACPQDTICRF-MLSNIFVGDPNQCGNYINCVNGYGTSEKCSSTANPYYNKATGNCQSTNPCTG 214

  Fly   144 ESCNAEAYLGF-----NCPAADSADDSAAAAVDVSPEG-ELRYYRHPQTCKKYFVC--VNGHPRL 200
            |..|:.....|     |..|.|.....||..:.|:.|. :.||.....||..|:.|  ||.....
  Fly   215 EDSNSGNSDQFTVGQTNATACDEEAFKAADPLTVNGESVDYRYVSDGVTCYGYYYCAAVNATGYW 279

  Fly   201 YNCGKYLAFNS 211
            ..|.....||:
  Fly   280 NQCPTGTQFNA 290

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
obst-ENP_723116.1 ChtBD2 23..65 CDD:214696 10/47 (21%)
CBM_14 95..146 CDD:426342 17/61 (28%)
CBM_14 180..225 CDD:426342 10/34 (29%)
CG6933NP_730495.1 ChtBD2 44..90 CDD:214696 14/65 (22%)

Return to query results.
Submit another query.