DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11147 and ABCA9

DIOPT Version :10

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_001330984.1 Gene:ABCA9 / 836295 AraportID:AT5G61730 Length:950 Species:Arabidopsis thaliana


Alignment Length:288 Identity:88/288 - (30%)
Similarity:142/288 - (49%) Gaps:24/288 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AVEVRNGYKYYG----------SKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQR 57
            ||::....|.|.          :|::|...:..|.||:.:..::.|||.:|.||||.:||:.|..
plant   519 AVQIHGLAKTYPGTTKLGCCKCTKTSPFHAVKGLWMNIAKDQLFCLLGPNGAGKTTTISCLTGIN 583

  Fly    58 RLNGGEVVVLGAKPGEPGSGVPGSR--VGFMPQEIALVEEMTVKETIFYFGRIYGLTDERIRE-K 119
            .:.||:..:.| .......|:...|  :|..||...|.:.::.:|.:..|..|.||....|:. .
plant   584 PVTGGDAKIYG-NSIRSSVGMSNIRKMIGVCPQFDILWDALSSEEHLHLFASIKGLPPSSIKSIA 647

  Fly   120 FKLLKELLQLPPARQMIKQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVET 184
            .|||.::.....|:......|||.:||||.|.|:|.||:|:.|||||.|:||:.|..:||.:.|:
plant   648 EKLLVDVKLTGSAKIRAGSYSGGMKRRLSVAIALIGDPKLVFLDEPTTGMDPITRRHVWDIIQES 712

  Fly   185 TRNSKLAVIITTHYIEEAK-QANCIGLMRNGVLLAEDTPTNIMIKFGTQSIEDAFLILSQRQGNE 248
            .:..  |:|:|||.:|||. .::.||:|..|.|....|...:..:|||..:.....|.:::.|..
plant   713 KKGR--AIILTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFVATVSFIENKKDGAP 775

  Fly   249 DELAQIMDH-------NKNQALPAAVLP 269
            :.|.:....       .:|:|....|:|
plant   776 EPLKRFFKERLKVEPTEENKAFMTFVIP 803

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 4..245 CDD:440746 81/254 (32%)
ABC2_membrane_3 322..702 CDD:463674
YadH 513..710 CDD:440604
ABCA9NP_001330984.1 rim_protein <232..>857 CDD:130324 88/288 (31%)
ABC_subfamily_A 520..753 CDD:213230 77/235 (33%)
Blue background indicates that the domain is not in the aligned region.

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