DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11147 and Abca12

DIOPT Version :9

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_780419.2 Gene:Abca12 / 74591 MGIID:2676312 Length:2595 Species:Mus musculus


Alignment Length:214 Identity:71/214 - (33%)
Similarity:123/214 - (57%) Gaps:7/214 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 IVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVVVLGAKPGEPGS-GVPGSRVG 84
            |.:|.:::.:..|..:||||.:|.||||:...:.|....:.|.:::.. |.|..|. ....|.||
Mouse  2271 IAVNNISLGIPAGECFGLLGVNGAGKTTIFKMLTGDIIPSSGNILIRN-KSGSLGHVDSHSSLVG 2334

  Fly    85 FMPQEIALVEEMTVKETIFYFGRIYGLTDERIREK-FKLLKELLQLPPARQMIKQCSGGQQRRLS 148
            :.|||.||.:.:||:|.::::.|::|:.::.|::. .|||:.|..:....:....||.|.:|:||
Mouse  2335 YCPQEDALDDLVTVEEHLYFYARVHGIPEKDIKDTVHKLLRRLHLMAYKDRSTSMCSYGTKRKLS 2399

  Fly   149 FACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSKLAVIITTHYIEEAKQANC--IGLM 211
            .|.|:|..|.:|:||||:.|:||..:..:|..:.|..:| |.:||:|:|.:||. :|.|  :.:|
Mouse  2400 TALALIGKPSILLLDEPSSGMDPKSKRHLWRIISEEVQN-KCSVILTSHSMEEC-EALCTRLAIM 2462

  Fly   212 RNGVLLAEDTPTNIMIKFG 230
            .||......:..:|..:||
Mouse  2463 VNGRFQCIGSLQHIKSRFG 2481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 1..282 CDD:224054 71/214 (33%)
P-loop_NTPase 4..222 CDD:304359 68/204 (33%)
ABC2_membrane_3 322..702 CDD:289468
ABC2_membrane 469..664 CDD:279410
Abca12NP_780419.2 ABC2_membrane_3 <1006..1267 CDD:289468
NosY <1108..1269 CDD:224196
ZnuC 1346..1570 CDD:224046
ABC_subfamily_A 1350..1565 CDD:213230
ABC2_membrane_3 <1913..2174 CDD:289468
CcmA 2253..2567 CDD:224054 71/214 (33%)
ABC_subfamily_A 2254..2477 CDD:213230 68/208 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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