DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11147 and abca12

DIOPT Version :9

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:XP_686632.6 Gene:abca12 / 558335 ZFINID:ZDB-GENE-030131-9790 Length:5913 Species:Danio rerio


Alignment Length:829 Identity:160/829 - (19%)
Similarity:271/829 - (32%) Gaps:286/829 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 KYYGSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVVVLGAKPGEPG 75
            |.||.::    .::.||::...|.:..|||.:|.||||.:|.:.|......|.:.|.|.   :..
Zfish  4673 KTYGKRN----AVDNLNLSFYEGHVTSLLGHNGAGKTTTMSLLTGLFAPTVGTIEVYGM---DMQ 4730

  Fly    76 SGVPGSR--VGFMPQEIALVEEMTVKETIFYFGRIYG--LTDERIREK-FKLLKELLQLPPARQM 135
            ..:...|  :|...|...|.:.:|.||.:..:.:|..  .|.:.::|: .|:|.|........:.
Zfish  4731 MFIDDVRKEMGVCMQYDVLFDHLTTKEHLLLYAQIKAPHWTKQEVKEQVHKILMETDMHAHRHKR 4795

  Fly   136 IKQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSKLAVIITTHYIE 200
            :...|||.:|:||.:.|.|....|::|||||.|:||..|..|||.:::  ...:..:|::||:::
Zfish  4796 VGTLSGGMKRKLSISIAFIGGSRLVVLDEPTTGVDPCSRRSIWDIIIQ--HKQERTIILSTHHLD 4858

  Fly   201 EAK-QANCIGLMRNGVLLAEDTPTNIMIKFG-------TQSIEDAFLILSQRQGNEDELAQIMDH 257
            ||: .::.|..:..|.|....:|..:..|..       |:.:|.|            :..:..|:
Zfish  4859 EAEVLSDRIAFLERGGLKCCGSPFYLKDKLAKGYNLTLTKKVETA------------DSKEKFDY 4911

  Fly   258 NKNQALPAAVLPPEVIDTHEPNMPEKQ--------PIPFEEP------------LNENRKKIFFT 302
            .|.:         :.|.:|.|:..:|.        .:|...|            |::|..|:...
Zfish  4912 EKLR---------DFIHSHLPDARQKDREMGDLVYALPPYTPQNASEYHSLLNSLDQNLDKLHLG 4967

  Fly   303 TKGRVKALMTKNFVQLFRQPSGIIFMLLFPIIQLTCFYLAIGKTPTNLEIGVYSGEVENYGECFD 367
            ..|.....:.:.|:||.|.                             ::.....|..:..|...
Zfish  4968 CYGISDTTLEEVFLQLTRD-----------------------------DLEPKESETWSVSESVI 5003

  Fly   368 ENLVTVYKDSDNESCLFNKLSCRYIRVLGDDVATRKYYASEADAL--NDAKRATTVGY------- 423
            ||.:...:||.:|.|                   ...|..|..:|  |...|...:|.       
Zfish  5004 ENDMFASRDSLSEDC-------------------NSMYLGEKASLTGNSTVRGFALGVQRVIAML 5049

  Fly   424 ---LHFAQN-----FSDSILSVM----EDGIHSSDGAVDH---AELSIHIDMTDQQVAYFMQR-- 471
               :|.::.     ||..:|.|:    ..|:.|....:.|   ..||..:...|:|.|:|..:  
Zfish  5050 LKRVHHSRRDWKGLFSQVLLPVLFVIAAMGLGSIKSDLQHFPEIVLSPALYHVDEQYAFFSNQNP 5114

  Fly   472 ---KLRDKFSTF--------------------------------MRSVVKDCNVSTAIVDLPVQF 501
               :|.|...::                                ..:....|..|..:...|.|.
Zfish  5115 NTSRLVDTMMSYPGIDHVCMTDPTDPVCKGRPSTGSQTWVSGGNSSATFTTCKCSNQVQSCPAQG 5179

  Fly   502 QEP----------IFGSTDIEFQQYCAPGVVMTMVFFLATLMTAAVFISERMDGIWD-------- 548
            .:|          ::..|.:..:.|              .|.||..||.:|..| |:        
Zfish  5180 YDPPRKRCPSSQIVYNLTGVNIENY--------------LLATANNFIRDRYGG-WEFGKPLPID 5229

  Fly   549 -----------RTLLAGVSATEMLW----AHLLTQLIIMALQSF--------------------- 577
                       |||       ..:|    .|......:.:|.:|                     
Zfish  5230 LKMDMLDVPANRTL-------SKVWYNSEGHHSMPAYLNSLNNFFLRSSLPPEKRYQYAISISSH 5287

  Fly   578 --------EVIMYIGLVFDTYNNGDTTTLIGLLTLTAFCGMLFGLFISVFCKSHT---------- 624
                    |.:|..|||         :.|:.|..||.:..|.....|....:.||          
Zfish  5288 PYPGQVQDEDLMVGGLV---------SILVALCVLTGYSIMTASFVIYEVQEHHTGSKRLQQISG 5343

  Fly   625 --EANFVATGAFYPMIILCGLLWPLESMPQFLQDLVMVLPFTIPSISAR 671
              |..:.....||.|        .|..:|..| .:|||..|.:|:.:.|
Zfish  5344 ISEPFYWIINFFYDM--------ALYMIPVVL-SVVMVAAFQLPAFTER 5383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 1..282 CDD:224054 71/283 (25%)
P-loop_NTPase 4..222 CDD:304359 61/216 (28%)
ABC2_membrane_3 322..702 CDD:289468 78/485 (16%)
ABC2_membrane 469..664 CDD:279410 47/305 (15%)
abca12XP_686632.6 ABC2_membrane_3 4268..4588 CDD:289468
CcmA 4666..4941 CDD:224054 72/297 (24%)
ABC_subfamily_A 4666..4885 CDD:213230 62/220 (28%)
ABC2_membrane_3 <5245..5493 CDD:289468 30/157 (19%)
CcmA 5572..5886 CDD:224054
ABC_subfamily_A 5573..5799 CDD:213230
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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