DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11147 and abca8

DIOPT Version :10

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:XP_031749971.1 Gene:abca8 / 549630 XenbaseID:XB-GENE-1005441 Length:1619 Species:Xenopus tropicalis


Alignment Length:267 Identity:78/267 - (29%)
Similarity:136/267 - (50%) Gaps:17/267 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 EVRNGYKYYGSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVVVLGA 69
            :|:.|..::  |.|.|.....::..|.:|.:.||||.:|.||||.:..:.|:.|...|||::.|.
 Frog  1280 KVKKGKSFF--KKNKKAATKNISFCVRKGEVLGLLGPNGAGKTTSIYMLAGEIRPTAGEVLLCGT 1342

  Fly    70 KPGEPGSGV--PGSRVGFMPQEIALVEEMTVKETIFYFGRIYGLTDERIREKFKLLKELLQLPP- 131
            .|.:..:..  |...:|:.||:..|...:|||:.:..:..:.||..:......|.:.|.|:|.. 
 Frog  1343 DPDKSQNSQYDPTGSLGYCPQDNPLWPNLTVKQHLEIYAAVKGLKKKDAETAIKRVSEALELKEH 1407

  Fly   132 ARQMIKQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSKLAVIITT 196
            ..:..::.|.|..|::.||.:|:.:|.:::||||:.||||..::::|..:....||.....|:||
 Frog  1408 LEKAARKLSAGVSRKVCFAISMLGNPNIVLLDEPSTGLDPKGQQRLWRAIRSAFRNKDRGAILTT 1472

  Fly   197 HYIEEAKQANC--IGLMRNGVLLAEDTPTNIMIKFGTQSIEDAFLILSQRQGNE-----DELAQI 254
            ||:||| :|.|  :.:|.:|.|....:...:..|||    :...|.:..:..|:     :|:.||
 Frog  1473 HYMEEA-EAVCDRVAIMVSGKLRCIGSIQQLKSKFG----KGYLLEIKVKNSNQVDQIHNEIIQI 1532

  Fly   255 MDHNKNQ 261
            ..|...|
 Frog  1533 FPHAARQ 1539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 4..245 CDD:440746 72/244 (30%)
ABC2_membrane_3 322..702 CDD:463674
YadH 513..710 CDD:440604
abca8XP_031749971.1 rim_protein <225..1601 CDD:130324 78/267 (29%)
Blue background indicates that the domain is not in the aligned region.

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