DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG11147 and CG6052

DIOPT Version :9

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_649002.3 Gene:CG6052 / 39971 FlyBaseID:FBgn0036747 Length:1725 Species:Drosophila melanogaster


Alignment Length:850 Identity:173/850 - (20%)
Similarity:304/850 - (35%) Gaps:272/850 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VEVRNGYKYYGSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVVVLG 68
            :::.|..|.||...    .:..:::.:.|..|..|||.:|.||||.::.|.|..:...|..:|.|
  Fly   540 IQLFNLQKNYGKLK----AVKGISLKMHRNEITVLLGHNGAGKTTTINMITGIVKPTSGTAIVNG 600

  Fly    69 -------AKPGEPGSGVPGSRVGFMPQEIALVEEMTVKETIFYFGRIYGLTDERI--REKFKLLK 124
                   ||..|        .:|..||...|.:||:|::.|.:|.::.|:...:.  .|..|.:.
  Fly   601 YDIRTHLAKARE--------SLGICPQNNILFKEMSVRDHIIFFSKLKGIRGTKAVENEVGKYMT 657

  Fly   125 ELLQLPPARQMIKQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSK 189
            .|.....:....|..|||.:|:||..||:..:.::::.|||:.|:|...|..:|| |:::.::.:
  Fly   658 MLKLQDKSYVAAKNLSGGMKRKLSLCCALCGNAKVVLCDEPSSGIDAAGRRSLWD-LLQSEKDGR 721

  Fly   190 LAVIITTHYIEEAK-QANCIGLMRNGVLLAEDTPTNIMIKFGTQSIEDAFLILSQRQGNED---- 249
             .:::||||::||. ..:.|.::..|.|..:.|...:..:|||     .:|::...|...|    
  Fly   722 -TILLTTHYMDEADVLGDRIAILSEGKLQCQGTSFYLKKRFGT-----GYLLVCIMQSGCDVGAV 780

  Fly   250 ----------------------------------ELAQIMDHNKNQ------ALPAAVLPPEVI- 273
                                              ||.|.:|....|      .|..|.|....: 
  Fly   781 TQLIRKYVPPIKPERVLGTELTYRLPTEYSKKFAELLQDLDEKCAQLQLVGYGLSGATLEDVFMA 845

  Fly   274 ---DTHEPNMPEKQPIP---------FEEPLNENRK-------------KIFFTTKGRVKALMTK 313
               |.......|..|:.         |:....|.|:             |.|:||        |:
  Fly   846 VNTDKRVQGGAEGPPVDGSIDFKELVFDSKTREKRRIRRCFMFWQALFLKKFYTT--------TR 902

  Fly   314 NFVQLFRQPSGIIFMLLFPIIQLTCFYLAIGKTPTNLEIGVYSGEVENYGECFDENLVTVYKDSD 378
            |:..|     ||..:|...::.||......|:                           :|.:..
  Fly   903 NYWLL-----GIQLVLPIAVMALTILNSRGGR---------------------------IYYELP 935

  Fly   379 NESCLFNKLSCRYIRVLGDDVATRKYYASEADALND-----AKRATTV--GYLHFAQNFSDSILS 436
            ......|:.|..|: ||.|:...:.  :|.|||.:.     |:|.|.:  |.|.|          
  Fly   936 AMPISINQYSSAYV-VLEDNTTDKT--SSLADAYSKHLEHYARRCTLLRTGDLKF---------- 987

  Fly   437 VMEDGIHSSDGAVDHA-ELSIH----IDMTDQQVAYFMQRK-----------LRDKFSTFMRSVV 485
              ||.|.|.|  |:|: .:..|    :.:::.....::..|           |.:..:  ::.:.
  Fly   988 --EDYILSHD--VNHSRRIDFHFLAGLTVSENNFIVWLNNKPLHTAPLTLNLLHNALA--IKLLG 1046

  Fly   486 KDCNVSTAIVDLPVQFQE----------PIFGSTDIEFQQYCAPGVVMTMVFFLATLMTAAVFIS 540
            :|  .||.:.:.|:.:.:          .:.|: :|..      .:.:||.|.  |...|...|.
  Fly  1047 QD--ASTYVTNEPLPYSDDTRTLRLNKGQVLGA-EISI------NLSLTMCFI--TAFYAIPIIR 1100

  Fly   541 ERMDGIWDRTLLAGVS-----ATEMLWAHLLTQL----IIMALQSFEVIMYIGLVFDTYNNGDTT 596
            ||.........|:||.     .:.::|.:|:..|    .|:.:.:|:.|.||..:       |.:
  Fly  1101 ERETRAKLLQFLSGVDVCAYWTSHIVWDYLVFVLSALSSILTIAAFKEIGYITPL-------DLS 1158

  Fly   597 TLIGLLTLTAFCGMLFGLFISVFCKSHTEANF---------VATGAFYPMIILCGLLWPLESMPQ 652
            ....:|.:..|.|::.. :.:..|.|.....|         :.||.|                  
  Fly  1159 RYFYMLLIFGFPGIMLS-YAASGCFSDAATGFTRISIINTLMGTGLF------------------ 1204

  Fly   653 FLQDLVMVLPFTIPSISARNVIEK-GW-----------SITHEKVYNGFLVMAGWTIIFFVLCLI 705
                 :|.:.....:...::|.|| .|           |.|| .::.|:.:..|        |.|
  Fly  1205 -----LMFMTLNFEAFQLKDVAEKLAWYFRLSPHYSLASSTH-SIHIGYNIRRG--------CSI 1255

  Fly   706 GIRRK 710
            |..||
  Fly  1256 GGIRK 1260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 1..282 CDD:224054 78/335 (23%)
P-loop_NTPase 4..222 CDD:304359 62/227 (27%)
ABC2_membrane_3 322..702 CDD:289468 78/442 (18%)
ABC2_membrane 469..664 CDD:279410 38/233 (16%)
CG6052NP_649002.3 rim_protein 21..>54 CDD:130324
rim_protein <149..1709 CDD:130324 172/849 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm46598
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.910

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