Protein Alignment CG11147 and ldd

DIOPT Version :10

• Sequence 1: NP_608954.1
• Gene: CG11147 / 33803
• FlyBaseID: FBgn0031734
• Length: 711
• Species: Drosophila melanogaster
• Sequence 2: NP_001285513.1
• Gene: ldd / 318066
• FlyBaseID: FBgn0083956
• Length: 1998
• Species: Drosophila melanogaster
• Alignment Length: 737
• Identity: 166/737 - (22%)
• Similarity: 286/737 - (38%)
• Gaps: 176/737 - (23%)

  Fly     8 NGYKYYGSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVVVLGAKPG 72
            |..|.|||    |..::.|:::..|..:..|||.:|.||:||:..:.||.|.:.|:|::.|.
  Fly   862 NVSKLYGS----KCAVSNLSLDFARNQVSCLLGRNGAGKSTLIKLLTGQIRQSSGKVLLAGE--- 919

  Fly    73 EPGSGVPGSRVGFMPQEIALVEEMTVKETIFYFGRI------YGLTDERIREKFKLLKEL----L 127
                    .:||...|:..|:..:|.:|.:..:.:|      .|..:|...|..:.|:.|    .
  Fly   920 --------HQVGVCWQDNILIPTLTAREHLQLYAQIKIPPGGSGGVEEIRSEVAQTLQSLNFGKH 976

  Fly   128 QLPPARQMIKQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSKLAV 192
            :..|:.|:    |||.:|||..|.|.|..|.::|||||..|:|...|:.||. |:|..|..: ||
  Fly   977 ESYPSWQL----SGGYRRRLCVAIAFIASPSVVILDEPCNGVDAKARKDIWQ-LIERLRQGR-AV 1035

  Fly   193 IITTHYIEEAKQ-ANCIGLMRNGVLLAEDT--------PTNIMIKFG-------TQSIEDAFLIL 241
            |..||:::|||. ::.:.:||||.::|:.:        .:|..|:..       |..|:.|..:|
  Fly  1036 IFATHFMDEAKYLSDSLVIMRNGRIIAQHSRDSLQRLCTSNYSIRLRCADATGVTFVIQKAQQLL 1100

  Fly   242 SQRQGNEDELAQI---MDHNKNQA---LPAAVLPPEVIDTH-------EPNMPEKQPIPFE-EPL 292
            .|.|......|..   :..|.:.|   .|.||...|::.:.       :..:.....:..| |.|
  Fly  1101 PQTQVTHSGAADYPHSLTINASYAEHLTPGAVEFLELLQSQVTAGSISDVELTTSSSLEQEFEQL 1165

  Fly   293 NEN------------RKKIFF----------TTKGRVKALMTKNFVQLFRQPSGIIFMLLFPIIQ 335
            |.|            |..:..          |...:.:.||.|....|.|....::::||.|.:.
  Fly  1166 NRNGEDAGPRRPASDRSGVVAGPAMITDEPPTACKQFRLLMGKRLRHLSRNYRLLLYVLLLPALF 1230

  Fly   336 LTCFYLAIG-------KTPTNLEIGVYSGEVE----NYGECFDENLVTVYK---DSDNESCLFNK 386
            ..|....:.       .|...|...:|....:    .....|.|.|....:   |...|..:||.
  Fly  1231 ELCAMWFVSYRLEDDFDTVLPLSRSLYPQTAQFLSHERATSFSEKLYPQLRTSCDHLGECRVFNT 1295

  Fly   387 LSCRYIRVLGD--DVATRKYYASEADALNDAKRATTVGYLHFAQNFSDSILSVMEDGIHSSDGAV 449
            ....|..||..  :.:.|:|                .||                 |::.|...|
  Fly  1296 SQQSYDWVLNSWGEYSERRY----------------GGY-----------------GLNGSGATV 1327

  Fly   450 DHAELSIHIDMTDQQVAYFMQRKLRDKFSTFMRSVVKDCNVSTAIVDLPVQFQEPIFGSTDIEFQ 514
            .:.....|          .|...|.|..|..:|:.:.|...|...::.|.:.......::.|..|
  Fly  1328 WYNNKGYH----------SMMAWLNDLNSELLRTTMNDSESSILTLNEPWKLGFAELSTSSILRQ 1382

  Fly   515 QYCAPGVVMTMVFFLATLMTAAVF-ISERMDGIWDRTLLAGVSA-----TEMLWAHLLTQLIIMA 573
            ......|.:.::.|...:.:.:|: ::||::|...:..|.||||     ..::|.:|:  :::..
  Fly  1383 AGDGSMVFILLIAFGLVVASGSVYLVNERVNGEKLQQRLCGVSAVTYWLVALVWDYLV--MVLGL 1445

  Fly   574 LQSFEVIMYIGL-VFDTYNNGDTTTLIGLLTLT-AF----------CGMLFG----LFISVFCKS 622
            :....||:..|: ||     .|...|:|::.|: ||          ...:|.    ..:|:||
  Fly  1446 IVCLVVILMFGMPVF-----VDRQQLVGIIGLSLAFSFACVPSVHVAEKIFSDSSIAIVSIFC-- 1503

  Fly   623 HTEANFVATGAFYPMIILCGLL 644
               ||.:.......:|::.|::
  Fly  1504 ---ANLIVPLVTMGIILILGVV 1522

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG11147	NP_608954.1	CcmA	4..245	CDD:440746	79/262 (30%)
		ABC2_membrane_3	322..702	CDD:463674	67/361 (19%)
		YadH	513..710	CDD:440604	33/154 (21%)
ldd	NP_001285513.1	rim_protein	179..1867	CDD:130324	166/737 (23%)