DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11147 and Abca7

DIOPT Version :10

Sequence 1:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster
Sequence 2:NP_997481.2 Gene:Abca7 / 299609 RGDID:1303134 Length:2170 Species:Rattus norvegicus


Alignment Length:329 Identity:86/329 - (26%)
Similarity:152/329 - (46%) Gaps:59/329 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VEVRNGYKYYGSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQRRLNGGEVVVLG 68
            |.:|...|::  :.:|:..|..||::...|.|...||.:|.||||.||.:.|....:.|...:||
  Rat   805 VSIRGLKKHF--RGSPQPALRGLNLDFYEGHITAFLGHNGAGKTTTLSILSGLFPPSSGSASILG 867

  Fly    69 ---------AKPGEPGSGVPGSRVGFMPQEIALVEEMTVKETIFYFGRIYGLTDERI-REKFKLL 123
                     .:|          .:|..||...|.:.:||:|.::::||:.|::...| .|:..|:
  Rat   868 HDVQTNMAAIRP----------HLGICPQYNVLFDMLTVEEHVWFYGRLKGVSAAAIDSEQEHLI 922

  Fly   124 KELLQLPPARQMIKQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNS 188
            :::..:|......:..|||.||:||.|.|.:....::|:||||.|:||..|..||:.|::.....
  Rat   923 RDVGLIPKRDTQTRHLSGGMQRKLSVAIAFVGGSRVVIMDEPTAGVDPASRRGIWELLLKYREGR 987

  Fly   189 KLAVIITTHYIEEAK-QANCIGLMRNGVLLAEDTPTNIMIKFG----------TQSI-------- 234
            .|  |::||:::||: ..:.:.::.:|.|....:|..:....|          :||:        
  Rat   988 TL--ILSTHHLDEAELLGDRVAMVASGSLCCCGSPLFLRRHLGCGYYLTLVKSSQSLVTHDLKGD 1050

  Fly   235 -EDAFLILSQRQGNEDELAQIM-----DHNKNQA--------LPAAVLPPEVIDTHEPNMPEKQP 285
             ||.  ...::.|:|.:.|..:     .|..:||        .|:|.|..|::..|.|.....:.
  Rat  1051 TEDP--RREKKSGSEGKTADTVLTRDGPHRSSQAPAPDAVPVTPSAALILELVQRHVPGAQLVEE 1113

  Fly   286 IPFE 289
            :|.|
  Rat  1114 LPHE 1117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11147NP_608954.1 CcmA 4..245 CDD:440746 72/270 (27%)
ABC2_membrane_3 322..702 CDD:463674
YadH 513..710 CDD:440604
Abca7NP_997481.2 rim_protein 1..2127 CDD:130324 86/329 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1044..1086 8/43 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2129..2170
Blue background indicates that the domain is not in the aligned region.

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